Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nub1P54729 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nub1P54729 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nub1P54729 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.19■□□□□ 0.82
Nub1P54729 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nub1P54729 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nub1P54729 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nub1P54729 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Nub1P54729 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nub1P54729 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nub1P54729 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Nub1P54729 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nub1P54729 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nub1P54729 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nub1P54729 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nub1P54729 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nub1P54729 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nub1P54729 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.18■□□□□ 0.82
Nub1P54729 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nub1P54729 Gm18671-201ENSMUST00000214826 683 ntBASIC20.18■□□□□ 0.82
Nub1P54729 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nub1P54729 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nub1P54729 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nub1P54729 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.18■□□□□ 0.82
Nub1P54729 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nub1P54729 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nub1P54729 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nub1P54729 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nub1P54729 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nub1P54729 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Nub1P54729 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nub1P54729 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nub1P54729 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nub1P54729 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nub1P54729 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nub1P54729 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nub1P54729 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Nub1P54729 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nub1P54729 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nub1P54729 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nub1P54729 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nub1P54729 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nub1P54729 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nub1P54729 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nub1P54729 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nub1P54729 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Nub1P54729 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nub1P54729 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nub1P54729 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.16■□□□□ 0.82
Nub1P54729 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Nub1P54729 Gm10849-201ENSMUST00000100397 618 ntBASIC20.15■□□□□ 0.82
Nub1P54729 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nub1P54729 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.15■□□□□ 0.82
Nub1P54729 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nub1P54729 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nub1P54729 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.15■□□□□ 0.82
Nub1P54729 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nub1P54729 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nub1P54729 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nub1P54729 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nub1P54729 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nub1P54729 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
Nub1P54729 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Nub1P54729 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Nub1P54729 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nub1P54729 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nub1P54729 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nub1P54729 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Nub1P54729 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Nub1P54729 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nub1P54729 Gm13534-201ENSMUST00000121169 513 ntBASIC20.14■□□□□ 0.81
Nub1P54729 AV356131-201ENSMUST00000206201 750 ntBASIC20.14■□□□□ 0.81
Nub1P54729 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.14■□□□□ 0.81
Nub1P54729 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nub1P54729 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nub1P54729 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Nub1P54729 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nub1P54729 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nub1P54729 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.13■□□□□ 0.81
Nub1P54729 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.13■□□□□ 0.81
Nub1P54729 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nub1P54729 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nub1P54729 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nub1P54729 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nub1P54729 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.13■□□□□ 0.81
Nub1P54729 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.13■□□□□ 0.81
Nub1P54729 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.13■□□□□ 0.81
Nub1P54729 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nub1P54729 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nub1P54729 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nub1P54729 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nub1P54729 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nub1P54729 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nub1P54729 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nub1P54729 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nub1P54729 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Nub1P54729 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nub1P54729 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.12■□□□□ 0.81
Nub1P54729 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nub1P54729 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms