Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm29994-201ENSMUST00000195495 1193 ntBASIC24.06■■□□□ 1.44
Msh6P54276 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Msh6P54276 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Msh6P54276 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Msh6P54276 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Msh6P54276 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Msh6P54276 Gm6576-201ENSMUST00000169678 883 ntBASIC24.05■■□□□ 1.44
Msh6P54276 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC24.05■■□□□ 1.44
Msh6P54276 Gm2559-201ENSMUST00000201323 363 ntBASIC24.05■■□□□ 1.44
Msh6P54276 AC124603.1-201ENSMUST00000223843 308 ntBASIC24.05■■□□□ 1.44
Msh6P54276 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Msh6P54276 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Msh6P54276 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Msh6P54276 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Msh6P54276 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
Msh6P54276 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
Msh6P54276 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Msh6P54276 Golph3-202ENSMUST00000226517 2359 ntBASIC24.04■■□□□ 1.44
Msh6P54276 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Msh6P54276 Gm20634-201ENSMUST00000090779 2956 ntBASIC24.04■■□□□ 1.44
Msh6P54276 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Msh6P54276 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Msh6P54276 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
Msh6P54276 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Msh6P54276 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Msh6P54276 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
Msh6P54276 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Msh6P54276 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Msh6P54276 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Msh6P54276 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Msh6P54276 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
Msh6P54276 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC24.03■■□□□ 1.44
Msh6P54276 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Msh6P54276 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
Msh6P54276 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC24.03■■□□□ 1.44
Msh6P54276 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC24.02■■□□□ 1.44
Msh6P54276 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Msh6P54276 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Msh6P54276 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Msh6P54276 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Msh6P54276 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Msh6P54276 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
Msh6P54276 Gm715-201ENSMUST00000117865 831 ntBASIC24.02■■□□□ 1.44
Msh6P54276 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC24.02■■□□□ 1.44
Msh6P54276 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Msh6P54276 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Msh6P54276 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
Msh6P54276 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Msh6P54276 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
Msh6P54276 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Msh6P54276 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Msh6P54276 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Msh6P54276 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Msh6P54276 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Msh6P54276 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Msh6P54276 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC24■■□□□ 1.43
Msh6P54276 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Msh6P54276 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC24■■□□□ 1.43
Msh6P54276 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC24■■□□□ 1.43
Msh6P54276 Arhgef33-211ENSMUST00000225658 473 ntBASIC24■■□□□ 1.43
Msh6P54276 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Msh6P54276 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Msh6P54276 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Msh6P54276 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Msh6P54276 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
Msh6P54276 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
Msh6P54276 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
Msh6P54276 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Msh6P54276 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Msh6P54276 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
Msh6P54276 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Msh6P54276 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Msh6P54276 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Msh6P54276 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Msh6P54276 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Msh6P54276 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC23.98■■□□□ 1.43
Msh6P54276 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC23.98■■□□□ 1.43
Msh6P54276 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Msh6P54276 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Msh6P54276 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Msh6P54276 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC23.97■■□□□ 1.43
Msh6P54276 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Msh6P54276 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Msh6P54276 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Msh6P54276 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Msh6P54276 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
Msh6P54276 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Msh6P54276 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC23.96■■□□□ 1.43
Msh6P54276 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Msh6P54276 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Msh6P54276 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
Msh6P54276 Gm10698-201ENSMUST00000182663 604 ntBASIC23.96■■□□□ 1.43
Msh6P54276 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Msh6P54276 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Msh6P54276 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Msh6P54276 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Msh6P54276 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC23.96■■□□□ 1.43
Msh6P54276 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Msh6P54276 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Msh6P54276 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms