Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Golph3-202ENSMUST00000226517 2359 ntBASIC15.56■□□□□ 0.08
Abca1P41233 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.56■□□□□ 0.08
Abca1P41233 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Abca1P41233 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Abca1P41233 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Abca1P41233 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Abca1P41233 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Abca1P41233 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.56■□□□□ 0.08
Abca1P41233 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.56■□□□□ 0.08
Abca1P41233 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Abca1P41233 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Abca1P41233 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Abca1P41233 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC15.56■□□□□ 0.08
Abca1P41233 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Abca1P41233 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Abca1P41233 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Abca1P41233 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Abca1P41233 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC15.55■□□□□ 0.08
Abca1P41233 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Abca1P41233 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Abca1P41233 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Abca1P41233 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Abca1P41233 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Abca1P41233 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Abca1P41233 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Abca1P41233 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Abca1P41233 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Abca1P41233 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Abca1P41233 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Abca1P41233 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Abca1P41233 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Abca1P41233 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Abca1P41233 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Abca1P41233 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Abca1P41233 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Abca1P41233 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Abca1P41233 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Abca1P41233 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Abca1P41233 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Abca1P41233 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Abca1P41233 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC15.54■□□□□ 0.08
Abca1P41233 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Abca1P41233 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Abca1P41233 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Abca1P41233 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Abca1P41233 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Abca1P41233 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Abca1P41233 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.54■□□□□ 0.08
Abca1P41233 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Abca1P41233 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Abca1P41233 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Abca1P41233 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Abca1P41233 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Abca1P41233 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Abca1P41233 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Abca1P41233 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Abca1P41233 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Abca1P41233 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Abca1P41233 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Abca1P41233 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Abca1P41233 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Abca1P41233 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Abca1P41233 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Abca1P41233 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Abca1P41233 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Abca1P41233 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Abca1P41233 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Abca1P41233 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Abca1P41233 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Abca1P41233 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.53■□□□□ 0.08
Abca1P41233 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Abca1P41233 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Abca1P41233 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
Abca1P41233 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Abca1P41233 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Abca1P41233 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Abca1P41233 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
Abca1P41233 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Abca1P41233 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Abca1P41233 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Abca1P41233 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Abca1P41233 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Abca1P41233 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Abca1P41233 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Abca1P41233 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Abca1P41233 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Abca1P41233 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Abca1P41233 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Abca1P41233 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.52■□□□□ 0.07
Abca1P41233 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Abca1P41233 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Abca1P41233 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Abca1P41233 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Abca1P41233 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Abca1P41233 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Abca1P41233 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Abca1P41233 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Abca1P41233 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.51■□□□□ 0.07
Abca1P41233 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.51■□□□□ 0.07
Abca1P41233 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms