Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.39■□□□□ 0.37
Foxa1P35582 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.39■□□□□ 0.37
Foxa1P35582 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Foxa1P35582 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Foxa1P35582 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Foxa1P35582 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Foxa1P35582 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.39■□□□□ 0.37
Foxa1P35582 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Foxa1P35582 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Foxa1P35582 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.38■□□□□ 0.37
Foxa1P35582 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Foxa1P35582 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
Foxa1P35582 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Foxa1P35582 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Foxa1P35582 Gm13534-201ENSMUST00000121169 513 ntBASIC17.38■□□□□ 0.37
Foxa1P35582 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Foxa1P35582 Gm42569-201ENSMUST00000200539 472 ntBASIC17.38■□□□□ 0.37
Foxa1P35582 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Foxa1P35582 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Foxa1P35582 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Foxa1P35582 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Foxa1P35582 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Foxa1P35582 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Foxa1P35582 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Foxa1P35582 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Foxa1P35582 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Foxa1P35582 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Foxa1P35582 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Foxa1P35582 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Foxa1P35582 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Foxa1P35582 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Foxa1P35582 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Foxa1P35582 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Foxa1P35582 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Foxa1P35582 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Foxa1P35582 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Foxa1P35582 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Foxa1P35582 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Foxa1P35582 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Foxa1P35582 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Foxa1P35582 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Foxa1P35582 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Foxa1P35582 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Foxa1P35582 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Foxa1P35582 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.36■□□□□ 0.37
Foxa1P35582 Gm7514-201ENSMUST00000209475 934 ntBASIC17.36■□□□□ 0.37
Foxa1P35582 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.36■□□□□ 0.37
Foxa1P35582 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Foxa1P35582 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Foxa1P35582 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Foxa1P35582 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Foxa1P35582 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Foxa1P35582 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Foxa1P35582 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Foxa1P35582 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Foxa1P35582 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Foxa1P35582 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Foxa1P35582 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Foxa1P35582 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Foxa1P35582 Gm10849-201ENSMUST00000100397 618 ntBASIC17.35■□□□□ 0.37
Foxa1P35582 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Foxa1P35582 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Foxa1P35582 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Foxa1P35582 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Foxa1P35582 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Foxa1P35582 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Foxa1P35582 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Foxa1P35582 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Foxa1P35582 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Foxa1P35582 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Foxa1P35582 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.34■□□□□ 0.37
Foxa1P35582 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Foxa1P35582 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Foxa1P35582 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Foxa1P35582 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.34■□□□□ 0.37
Foxa1P35582 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Foxa1P35582 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.34■□□□□ 0.37
Foxa1P35582 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.34■□□□□ 0.37
Foxa1P35582 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Foxa1P35582 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Foxa1P35582 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Foxa1P35582 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Foxa1P35582 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Foxa1P35582 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Foxa1P35582 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Foxa1P35582 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Foxa1P35582 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Foxa1P35582 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Foxa1P35582 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Foxa1P35582 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Foxa1P35582 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Foxa1P35582 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.33■□□□□ 0.36
Foxa1P35582 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.33■□□□□ 0.36
Foxa1P35582 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.33■□□□□ 0.36
Foxa1P35582 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Foxa1P35582 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Foxa1P35582 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Foxa1P35582 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Foxa1P35582 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Foxa1P35582 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms