Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
MSR1P21757 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MSR1P21757 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
MSR1P21757 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MSR1P21757 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MSR1P21757 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MSR1P21757 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MSR1P21757 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MSR1P21757 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MSR1P21757 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.85■□□□□ 0.61
MSR1P21757 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.85■□□□□ 0.61
MSR1P21757 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.85■□□□□ 0.61
MSR1P21757 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.85■□□□□ 0.61
MSR1P21757 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.85■□□□□ 0.61
MSR1P21757 AL136967.2-201ENST00000623968 743 ntBASIC18.85■□□□□ 0.61
MSR1P21757 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MSR1P21757 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MSR1P21757 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
MSR1P21757 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
MSR1P21757 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
MSR1P21757 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MSR1P21757 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
MSR1P21757 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MSR1P21757 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MSR1P21757 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.84■□□□□ 0.61
MSR1P21757 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MSR1P21757 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.84■□□□□ 0.61
MSR1P21757 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.84■□□□□ 0.61
MSR1P21757 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.84■□□□□ 0.61
MSR1P21757 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MSR1P21757 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MSR1P21757 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MSR1P21757 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MSR1P21757 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MSR1P21757 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MSR1P21757 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
MSR1P21757 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MSR1P21757 AC026471.6-201ENST00000622954 1905 ntBASIC18.83■□□□□ 0.6
MSR1P21757 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
MSR1P21757 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
MSR1P21757 SUDS3P1-201ENST00000505831 966 ntBASIC18.83■□□□□ 0.6
MSR1P21757 AC104564.3-201ENST00000582367 638 ntBASIC18.83■□□□□ 0.6
MSR1P21757 AC105233.4-201ENST00000642045 216 ntBASIC18.83■□□□□ 0.6
MSR1P21757 AC244015.2-201ENST00000616358 1861 ntBASIC18.83■□□□□ 0.6
MSR1P21757 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MSR1P21757 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
MSR1P21757 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MSR1P21757 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.83■□□□□ 0.6
MSR1P21757 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.83■□□□□ 0.6
MSR1P21757 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.83■□□□□ 0.6
MSR1P21757 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.83■□□□□ 0.6
MSR1P21757 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
MSR1P21757 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MSR1P21757 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MSR1P21757 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
MSR1P21757 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.82■□□□□ 0.6
MSR1P21757 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MSR1P21757 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MSR1P21757 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MSR1P21757 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.82■□□□□ 0.6
MSR1P21757 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.82■□□□□ 0.6
MSR1P21757 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
MSR1P21757 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MSR1P21757 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MSR1P21757 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MSR1P21757 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MSR1P21757 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MSR1P21757 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
MSR1P21757 MIR572-201ENST00000384983 95 ntBASIC18.81■□□□□ 0.6
MSR1P21757 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.81■□□□□ 0.6
MSR1P21757 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.81■□□□□ 0.6
MSR1P21757 AC142381.2-201ENST00000566120 298 ntBASIC18.81■□□□□ 0.6
MSR1P21757 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MSR1P21757 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MSR1P21757 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.81■□□□□ 0.6
MSR1P21757 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.81■□□□□ 0.6
MSR1P21757 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MSR1P21757 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
MSR1P21757 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MSR1P21757 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.8■□□□□ 0.6
MSR1P21757 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MSR1P21757 CLDN5-201ENST00000403084 2357 ntBASIC18.8■□□□□ 0.6
MSR1P21757 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.8■□□□□ 0.6
MSR1P21757 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
MSR1P21757 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
MSR1P21757 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.8■□□□□ 0.6
MSR1P21757 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.8■□□□□ 0.6
MSR1P21757 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MSR1P21757 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.8■□□□□ 0.6
MSR1P21757 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MSR1P21757 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MSR1P21757 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.8■□□□□ 0.6
MSR1P21757 AP006587.3-201ENST00000525742 1516 ntBASIC18.79■□□□□ 0.6
MSR1P21757 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
MSR1P21757 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
MSR1P21757 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
MSR1P21757 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MSR1P21757 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.79■□□□□ 0.6
MSR1P21757 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.79■□□□□ 0.6
MSR1P21757 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms