Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
IkbkbO88351 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
IkbkbO88351 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
IkbkbO88351 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
IkbkbO88351 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
IkbkbO88351 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
IkbkbO88351 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
IkbkbO88351 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IkbkbO88351 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IkbkbO88351 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
IkbkbO88351 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
IkbkbO88351 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
IkbkbO88351 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IkbkbO88351 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
IkbkbO88351 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
IkbkbO88351 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
IkbkbO88351 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IkbkbO88351 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IkbkbO88351 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
IkbkbO88351 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IkbkbO88351 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
IkbkbO88351 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
IkbkbO88351 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
IkbkbO88351 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.78■□□□□ 0.92
IkbkbO88351 Gm37179-201ENSMUST00000194862 823 ntBASIC20.78■□□□□ 0.92
IkbkbO88351 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IkbkbO88351 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
IkbkbO88351 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
IkbkbO88351 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IkbkbO88351 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
IkbkbO88351 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
IkbkbO88351 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
IkbkbO88351 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.77■□□□□ 0.92
IkbkbO88351 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
IkbkbO88351 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.77■□□□□ 0.92
IkbkbO88351 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
IkbkbO88351 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.77■□□□□ 0.92
IkbkbO88351 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
IkbkbO88351 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
IkbkbO88351 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
IkbkbO88351 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.77■□□□□ 0.91
IkbkbO88351 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
IkbkbO88351 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
IkbkbO88351 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
IkbkbO88351 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
IkbkbO88351 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
IkbkbO88351 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
IkbkbO88351 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
IkbkbO88351 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
IkbkbO88351 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
IkbkbO88351 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
IkbkbO88351 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
IkbkbO88351 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
IkbkbO88351 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
IkbkbO88351 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
IkbkbO88351 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
IkbkbO88351 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
IkbkbO88351 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.75■□□□□ 0.91
IkbkbO88351 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
IkbkbO88351 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
IkbkbO88351 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.75■□□□□ 0.91
IkbkbO88351 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.75■□□□□ 0.91
IkbkbO88351 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
IkbkbO88351 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
IkbkbO88351 Gm29257-201ENSMUST00000186115 639 ntBASIC20.75■□□□□ 0.91
IkbkbO88351 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.75■□□□□ 0.91
IkbkbO88351 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
IkbkbO88351 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
IkbkbO88351 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
IkbkbO88351 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
IkbkbO88351 BC021767-201ENSMUST00000126387 1716 ntBASIC20.74■□□□□ 0.91
IkbkbO88351 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
IkbkbO88351 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.74■□□□□ 0.91
IkbkbO88351 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.74■□□□□ 0.91
IkbkbO88351 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
IkbkbO88351 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
IkbkbO88351 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
IkbkbO88351 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
IkbkbO88351 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
IkbkbO88351 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
IkbkbO88351 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
IkbkbO88351 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
IkbkbO88351 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
IkbkbO88351 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.73■□□□□ 0.91
IkbkbO88351 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
IkbkbO88351 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
IkbkbO88351 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.73■□□□□ 0.91
IkbkbO88351 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
IkbkbO88351 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
IkbkbO88351 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
IkbkbO88351 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
IkbkbO88351 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
IkbkbO88351 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
IkbkbO88351 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
IkbkbO88351 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.72■□□□□ 0.91
IkbkbO88351 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
IkbkbO88351 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.72■□□□□ 0.91
IkbkbO88351 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.72■□□□□ 0.91
IkbkbO88351 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
IkbkbO88351 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms