Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
Alx3O70137 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Alx3O70137 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.05■□□□□ 0.32
Alx3O70137 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Alx3O70137 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Alx3O70137 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Alx3O70137 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Alx3O70137 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Alx3O70137 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Alx3O70137 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Alx3O70137 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Alx3O70137 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.04■□□□□ 0.32
Alx3O70137 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.04■□□□□ 0.32
Alx3O70137 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Alx3O70137 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.04■□□□□ 0.32
Alx3O70137 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Alx3O70137 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Alx3O70137 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Alx3O70137 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Alx3O70137 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Alx3O70137 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Alx3O70137 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Alx3O70137 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Alx3O70137 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Alx3O70137 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Alx3O70137 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Alx3O70137 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.03■□□□□ 0.32
Alx3O70137 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Alx3O70137 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Alx3O70137 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Alx3O70137 Gm12251-201ENSMUST00000117893 792 ntBASIC17.03■□□□□ 0.32
Alx3O70137 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Alx3O70137 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Alx3O70137 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Alx3O70137 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.03■□□□□ 0.32
Alx3O70137 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.03■□□□□ 0.32
Alx3O70137 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.03■□□□□ 0.32
Alx3O70137 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Alx3O70137 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Alx3O70137 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Alx3O70137 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Alx3O70137 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Alx3O70137 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Alx3O70137 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Alx3O70137 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Alx3O70137 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.02■□□□□ 0.32
Alx3O70137 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Alx3O70137 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Alx3O70137 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Alx3O70137 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Alx3O70137 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Alx3O70137 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Alx3O70137 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
Alx3O70137 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.02■□□□□ 0.32
Alx3O70137 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.02■□□□□ 0.32
Alx3O70137 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Alx3O70137 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Alx3O70137 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Alx3O70137 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Alx3O70137 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Alx3O70137 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Alx3O70137 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alx3O70137 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.01■□□□□ 0.31
Alx3O70137 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alx3O70137 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alx3O70137 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alx3O70137 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alx3O70137 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alx3O70137 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alx3O70137 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alx3O70137 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Alx3O70137 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Alx3O70137 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17■□□□□ 0.31
Alx3O70137 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17■□□□□ 0.31
Alx3O70137 Gm12821-201ENSMUST00000120022 600 ntBASIC17■□□□□ 0.31
Alx3O70137 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Alx3O70137 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17■□□□□ 0.31
Alx3O70137 Smad6-203ENSMUST00000179458 273 ntBASIC17■□□□□ 0.31
Alx3O70137 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Alx3O70137 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Alx3O70137 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Alx3O70137 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Alx3O70137 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Alx3O70137 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Alx3O70137 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Alx3O70137 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.99■□□□□ 0.31
Alx3O70137 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Alx3O70137 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Alx3O70137 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Alx3O70137 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Alx3O70137 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Alx3O70137 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Alx3O70137 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Alx3O70137 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Alx3O70137 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Alx3O70137 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Alx3O70137 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Alx3O70137 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Alx3O70137 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Alx3O70137 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms