Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.56■□□□□ 0.88
Clk2O35491 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clk2O35491 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.56■□□□□ 0.88
Clk2O35491 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Clk2O35491 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Clk2O35491 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clk2O35491 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clk2O35491 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Clk2O35491 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.55■□□□□ 0.88
Clk2O35491 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Clk2O35491 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clk2O35491 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Clk2O35491 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clk2O35491 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Clk2O35491 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Clk2O35491 Rab3c-203ENSMUST00000224180 967 ntBASIC20.55■□□□□ 0.88
Clk2O35491 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Clk2O35491 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clk2O35491 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clk2O35491 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.55■□□□□ 0.88
Clk2O35491 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clk2O35491 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Clk2O35491 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clk2O35491 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.55■□□□□ 0.88
Clk2O35491 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clk2O35491 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clk2O35491 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clk2O35491 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Clk2O35491 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clk2O35491 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Clk2O35491 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clk2O35491 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.54■□□□□ 0.88
Clk2O35491 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clk2O35491 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Clk2O35491 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Clk2O35491 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Clk2O35491 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clk2O35491 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Clk2O35491 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clk2O35491 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Clk2O35491 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clk2O35491 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clk2O35491 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clk2O35491 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clk2O35491 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Clk2O35491 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clk2O35491 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
Clk2O35491 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clk2O35491 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clk2O35491 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.52■□□□□ 0.88
Clk2O35491 Gm10653-202ENSMUST00000139570 835 ntBASIC20.52■□□□□ 0.88
Clk2O35491 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.52■□□□□ 0.88
Clk2O35491 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clk2O35491 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Clk2O35491 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Clk2O35491 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.52■□□□□ 0.88
Clk2O35491 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Clk2O35491 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clk2O35491 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clk2O35491 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Clk2O35491 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clk2O35491 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Clk2O35491 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Clk2O35491 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Clk2O35491 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clk2O35491 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clk2O35491 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.51■□□□□ 0.87
Clk2O35491 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.51■□□□□ 0.87
Clk2O35491 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.51■□□□□ 0.87
Clk2O35491 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.51■□□□□ 0.87
Clk2O35491 Gm20049-201ENSMUST00000219950 730 ntBASIC20.51■□□□□ 0.87
Clk2O35491 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clk2O35491 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Clk2O35491 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Clk2O35491 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clk2O35491 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Clk2O35491 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.51■□□□□ 0.87
Clk2O35491 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Clk2O35491 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clk2O35491 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clk2O35491 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Clk2O35491 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.5■□□□□ 0.87
Clk2O35491 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clk2O35491 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clk2O35491 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clk2O35491 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.5■□□□□ 0.87
Clk2O35491 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.5■□□□□ 0.87
Clk2O35491 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clk2O35491 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.5■□□□□ 0.87
Clk2O35491 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clk2O35491 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Clk2O35491 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Clk2O35491 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clk2O35491 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Clk2O35491 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.49■□□□□ 0.87
Clk2O35491 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Clk2O35491 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clk2O35491 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.49■□□□□ 0.87
Clk2O35491 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clk2O35491 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms