Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tnfrsf11aO35305 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tnfrsf11aO35305 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.35■□□□□ 0.85
Tnfrsf11aO35305 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tnfrsf11aO35305 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tnfrsf11aO35305 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.35■□□□□ 0.85
Tnfrsf11aO35305 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tnfrsf11aO35305 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfrsf11aO35305 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfrsf11aO35305 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfrsf11aO35305 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfrsf11aO35305 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfrsf11aO35305 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfrsf11aO35305 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.34■□□□□ 0.85
Tnfrsf11aO35305 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfrsf11aO35305 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfrsf11aO35305 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfrsf11aO35305 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.34■□□□□ 0.85
Tnfrsf11aO35305 AV356131-201ENSMUST00000206201 750 ntBASIC20.34■□□□□ 0.85
Tnfrsf11aO35305 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfrsf11aO35305 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfrsf11aO35305 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.34■□□□□ 0.85
Tnfrsf11aO35305 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfrsf11aO35305 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.33■□□□□ 0.85
Tnfrsf11aO35305 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tnfrsf11aO35305 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.33■□□□□ 0.85
Tnfrsf11aO35305 Gm18671-201ENSMUST00000214826 683 ntBASIC20.33■□□□□ 0.85
Tnfrsf11aO35305 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Tnfrsf11aO35305 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.33■□□□□ 0.84
Tnfrsf11aO35305 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tnfrsf11aO35305 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tnfrsf11aO35305 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tnfrsf11aO35305 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.33■□□□□ 0.84
Tnfrsf11aO35305 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
Tnfrsf11aO35305 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Tnfrsf11aO35305 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Tnfrsf11aO35305 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tnfrsf11aO35305 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Tnfrsf11aO35305 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tnfrsf11aO35305 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Tnfrsf11aO35305 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tnfrsf11aO35305 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.32■□□□□ 0.84
Tnfrsf11aO35305 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tnfrsf11aO35305 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tnfrsf11aO35305 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tnfrsf11aO35305 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tnfrsf11aO35305 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.32■□□□□ 0.84
Tnfrsf11aO35305 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.32■□□□□ 0.84
Tnfrsf11aO35305 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tnfrsf11aO35305 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tnfrsf11aO35305 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnfrsf11aO35305 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tnfrsf11aO35305 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnfrsf11aO35305 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Tnfrsf11aO35305 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Tnfrsf11aO35305 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
Tnfrsf11aO35305 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnfrsf11aO35305 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnfrsf11aO35305 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnfrsf11aO35305 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnfrsf11aO35305 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnfrsf11aO35305 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfrsf11aO35305 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfrsf11aO35305 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfrsf11aO35305 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfrsf11aO35305 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfrsf11aO35305 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfrsf11aO35305 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfrsf11aO35305 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfrsf11aO35305 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfrsf11aO35305 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf11aO35305 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf11aO35305 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf11aO35305 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf11aO35305 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.29■□□□□ 0.84
Tnfrsf11aO35305 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf11aO35305 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf11aO35305 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf11aO35305 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf11aO35305 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.29■□□□□ 0.84
Tnfrsf11aO35305 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.29■□□□□ 0.84
Tnfrsf11aO35305 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf11aO35305 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Tnfrsf11aO35305 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf11aO35305 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf11aO35305 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.29■□□□□ 0.84
Tnfrsf11aO35305 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf11aO35305 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf11aO35305 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf11aO35305 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Tnfrsf11aO35305 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Tnfrsf11aO35305 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tnfrsf11aO35305 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnfrsf11aO35305 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnfrsf11aO35305 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tnfrsf11aO35305 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Tnfrsf11aO35305 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnfrsf11aO35305 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.27■□□□□ 0.84
Tnfrsf11aO35305 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tnfrsf11aO35305 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms