Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cpsf2O35218 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cpsf2O35218 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cpsf2O35218 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cpsf2O35218 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Cpsf2O35218 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cpsf2O35218 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cpsf2O35218 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cpsf2O35218 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.05■□□□□ 0.8
Cpsf2O35218 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpsf2O35218 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpsf2O35218 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Cpsf2O35218 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpsf2O35218 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpsf2O35218 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpsf2O35218 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Cpsf2O35218 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.04■□□□□ 0.8
Cpsf2O35218 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.04■□□□□ 0.8
Cpsf2O35218 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.04■□□□□ 0.8
Cpsf2O35218 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpsf2O35218 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.03■□□□□ 0.8
Cpsf2O35218 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cpsf2O35218 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cpsf2O35218 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cpsf2O35218 Smad6-203ENSMUST00000179458 273 ntBASIC20.03■□□□□ 0.8
Cpsf2O35218 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.03■□□□□ 0.8
Cpsf2O35218 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cpsf2O35218 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cpsf2O35218 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cpsf2O35218 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.02■□□□□ 0.8
Cpsf2O35218 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cpsf2O35218 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cpsf2O35218 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cpsf2O35218 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cpsf2O35218 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cpsf2O35218 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cpsf2O35218 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Cpsf2O35218 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cpsf2O35218 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cpsf2O35218 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cpsf2O35218 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cpsf2O35218 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cpsf2O35218 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cpsf2O35218 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Cpsf2O35218 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cpsf2O35218 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Cpsf2O35218 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
Cpsf2O35218 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.01■□□□□ 0.79
Cpsf2O35218 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cpsf2O35218 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cpsf2O35218 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cpsf2O35218 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cpsf2O35218 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cpsf2O35218 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Cpsf2O35218 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cpsf2O35218 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cpsf2O35218 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Cpsf2O35218 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cpsf2O35218 Gm11421-201ENSMUST00000122124 294 ntBASIC20■□□□□ 0.79
Cpsf2O35218 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cpsf2O35218 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cpsf2O35218 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Cpsf2O35218 Gm8493-201ENSMUST00000196881 489 ntBASIC20■□□□□ 0.79
Cpsf2O35218 Wdr70-203ENSMUST00000227371 1130 ntBASIC20■□□□□ 0.79
Cpsf2O35218 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cpsf2O35218 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cpsf2O35218 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cpsf2O35218 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20■□□□□ 0.79
Cpsf2O35218 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cpsf2O35218 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cpsf2O35218 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Cpsf2O35218 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cpsf2O35218 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cpsf2O35218 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Cpsf2O35218 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Cpsf2O35218 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cpsf2O35218 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cpsf2O35218 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cpsf2O35218 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cpsf2O35218 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cpsf2O35218 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cpsf2O35218 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
Cpsf2O35218 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cpsf2O35218 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.99■□□□□ 0.79
Cpsf2O35218 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cpsf2O35218 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cpsf2O35218 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.98■□□□□ 0.79
Cpsf2O35218 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cpsf2O35218 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cpsf2O35218 Gm43173-201ENSMUST00000202246 593 ntBASIC19.98■□□□□ 0.79
Cpsf2O35218 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.98■□□□□ 0.79
Cpsf2O35218 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cpsf2O35218 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Cpsf2O35218 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cpsf2O35218 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cpsf2O35218 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cpsf2O35218 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cpsf2O35218 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cpsf2O35218 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Cpsf2O35218 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms