Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh2b3O09039 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Sh2b3O09039 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh2b3O09039 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.69■□□□□ 0.26
Sh2b3O09039 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Sh2b3O09039 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.69■□□□□ 0.26
Sh2b3O09039 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh2b3O09039 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Sh2b3O09039 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Sh2b3O09039 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Sh2b3O09039 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh2b3O09039 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sh2b3O09039 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Sh2b3O09039 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh2b3O09039 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh2b3O09039 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh2b3O09039 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh2b3O09039 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Sh2b3O09039 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh2b3O09039 Mir5133-201ENSMUST00000174955 77 ntBASIC16.68■□□□□ 0.26
Sh2b3O09039 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh2b3O09039 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
Sh2b3O09039 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Sh2b3O09039 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh2b3O09039 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh2b3O09039 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Sh2b3O09039 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh2b3O09039 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh2b3O09039 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh2b3O09039 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Sh2b3O09039 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh2b3O09039 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh2b3O09039 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh2b3O09039 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh2b3O09039 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Sh2b3O09039 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh2b3O09039 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sh2b3O09039 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.67■□□□□ 0.26
Sh2b3O09039 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh2b3O09039 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh2b3O09039 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sh2b3O09039 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh2b3O09039 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Sh2b3O09039 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh2b3O09039 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sh2b3O09039 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh2b3O09039 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh2b3O09039 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Sh2b3O09039 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh2b3O09039 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sh2b3O09039 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.66■□□□□ 0.26
Sh2b3O09039 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Sh2b3O09039 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Sh2b3O09039 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sh2b3O09039 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Sh2b3O09039 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh2b3O09039 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sh2b3O09039 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.66■□□□□ 0.26
Sh2b3O09039 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh2b3O09039 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Sh2b3O09039 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh2b3O09039 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh2b3O09039 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh2b3O09039 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh2b3O09039 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sh2b3O09039 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sh2b3O09039 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.65■□□□□ 0.26
Sh2b3O09039 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.65■□□□□ 0.26
Sh2b3O09039 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Sh2b3O09039 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Sh2b3O09039 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.65■□□□□ 0.26
Sh2b3O09039 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.65■□□□□ 0.26
Sh2b3O09039 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sh2b3O09039 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.65■□□□□ 0.26
Sh2b3O09039 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.65■□□□□ 0.26
Sh2b3O09039 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sh2b3O09039 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.65■□□□□ 0.26
Sh2b3O09039 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sh2b3O09039 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sh2b3O09039 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sh2b3O09039 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Sh2b3O09039 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sh2b3O09039 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Sh2b3O09039 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh2b3O09039 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh2b3O09039 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh2b3O09039 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.64■□□□□ 0.25
Sh2b3O09039 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh2b3O09039 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh2b3O09039 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh2b3O09039 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh2b3O09039 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh2b3O09039 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh2b3O09039 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh2b3O09039 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh2b3O09039 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh2b3O09039 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh2b3O09039 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh2b3O09039 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh2b3O09039 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms