Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.24■□□□□ 0.83
UPK1AO00322 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
UPK1AO00322 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.24■□□□□ 0.83
UPK1AO00322 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.24■□□□□ 0.83
UPK1AO00322 OXCT2P1-201ENST00000447263 1535 ntBASIC20.24■□□□□ 0.83
UPK1AO00322 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
UPK1AO00322 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
UPK1AO00322 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.24■□□□□ 0.83
UPK1AO00322 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UPK1AO00322 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UPK1AO00322 AF106564.1-201ENST00000607058 2553 ntBASIC20.24■□□□□ 0.83
UPK1AO00322 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.24■□□□□ 0.83
UPK1AO00322 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
UPK1AO00322 AL157384.1-201ENST00000445995 2473 ntBASIC20.24■□□□□ 0.83
UPK1AO00322 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
UPK1AO00322 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.23■□□□□ 0.83
UPK1AO00322 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
UPK1AO00322 Z98882.1-201ENST00000622160 2253 ntBASIC20.23■□□□□ 0.83
UPK1AO00322 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UPK1AO00322 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
UPK1AO00322 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.23■□□□□ 0.83
UPK1AO00322 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.23■□□□□ 0.83
UPK1AO00322 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UPK1AO00322 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
UPK1AO00322 AC233992.3-201ENST00000607491 485 ntBASIC20.23■□□□□ 0.83
UPK1AO00322 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.23■□□□□ 0.83
UPK1AO00322 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UPK1AO00322 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.22■□□□□ 0.83
UPK1AO00322 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UPK1AO00322 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.22■□□□□ 0.83
UPK1AO00322 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UPK1AO00322 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.22■□□□□ 0.83
UPK1AO00322 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UPK1AO00322 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UPK1AO00322 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UPK1AO00322 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UPK1AO00322 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UPK1AO00322 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.22■□□□□ 0.83
UPK1AO00322 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.22■□□□□ 0.83
UPK1AO00322 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.22■□□□□ 0.83
UPK1AO00322 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
UPK1AO00322 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.22■□□□□ 0.83
UPK1AO00322 FEM1AP4-201ENST00000443167 1987 ntBASIC20.22■□□□□ 0.83
UPK1AO00322 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UPK1AO00322 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UPK1AO00322 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPK1AO00322 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UPK1AO00322 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.21■□□□□ 0.83
UPK1AO00322 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.21■□□□□ 0.83
UPK1AO00322 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPK1AO00322 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPK1AO00322 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.21■□□□□ 0.83
UPK1AO00322 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.21■□□□□ 0.83
UPK1AO00322 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPK1AO00322 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.21■□□□□ 0.83
UPK1AO00322 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPK1AO00322 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPK1AO00322 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
UPK1AO00322 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.21■□□□□ 0.83
UPK1AO00322 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPK1AO00322 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UPK1AO00322 OR7E47P-201ENST00000546390 1422 ntBASIC20.2■□□□□ 0.82
UPK1AO00322 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPK1AO00322 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPK1AO00322 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
UPK1AO00322 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPK1AO00322 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.2■□□□□ 0.82
UPK1AO00322 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.2■□□□□ 0.82
UPK1AO00322 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UPK1AO00322 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UPK1AO00322 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
UPK1AO00322 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UPK1AO00322 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPK1AO00322 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPK1AO00322 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.2■□□□□ 0.82
UPK1AO00322 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPK1AO00322 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPK1AO00322 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UPK1AO00322 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
UPK1AO00322 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPK1AO00322 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
UPK1AO00322 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UPK1AO00322 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPK1AO00322 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.19■□□□□ 0.82
UPK1AO00322 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
UPK1AO00322 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.19■□□□□ 0.82
UPK1AO00322 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPK1AO00322 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPK1AO00322 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPK1AO00322 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
UPK1AO00322 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
UPK1AO00322 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.19■□□□□ 0.82
UPK1AO00322 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UPK1AO00322 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.19■□□□□ 0.82
UPK1AO00322 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
UPK1AO00322 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
UPK1AO00322 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPK1AO00322 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPK1AO00322 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.19■□□□□ 0.82
UPK1AO00322 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms