Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm10553J3QPF1 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm10553J3QPF1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm10553J3QPF1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Gm10553J3QPF1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm10553J3QPF1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm10553J3QPF1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm10553J3QPF1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm10553J3QPF1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm10553J3QPF1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.36□□□□□ -0.11
Gm10553J3QPF1 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Gm10553J3QPF1 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm10553J3QPF1 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC14.36□□□□□ -0.11
Gm10553J3QPF1 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC14.36□□□□□ -0.11
Gm10553J3QPF1 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm10553J3QPF1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm10553J3QPF1 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm10553J3QPF1 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm10553J3QPF1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm10553J3QPF1 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm10553J3QPF1 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm10553J3QPF1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm10553J3QPF1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm10553J3QPF1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm10553J3QPF1 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm10553J3QPF1 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.35□□□□□ -0.11
Gm10553J3QPF1 Gm37179-201ENSMUST00000194862 823 ntBASIC14.35□□□□□ -0.11
Gm10553J3QPF1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm10553J3QPF1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm10553J3QPF1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm10553J3QPF1 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm10553J3QPF1 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm10553J3QPF1 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm10553J3QPF1 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.35□□□□□ -0.11
Gm10553J3QPF1 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm10553J3QPF1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Gm10553J3QPF1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm10553J3QPF1 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Gm10553J3QPF1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm10553J3QPF1 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm10553J3QPF1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm10553J3QPF1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm10553J3QPF1 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm10553J3QPF1 Gm13534-201ENSMUST00000121169 513 ntBASIC14.34□□□□□ -0.11
Gm10553J3QPF1 Nespas-201ENSMUST00000143738 1083 ntBASIC14.34□□□□□ -0.11
Gm10553J3QPF1 Gm6420-201ENSMUST00000193885 723 ntBASIC14.34□□□□□ -0.11
Gm10553J3QPF1 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm10553J3QPF1 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC14.34□□□□□ -0.11
Gm10553J3QPF1 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm10553J3QPF1 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm10553J3QPF1 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm10553J3QPF1 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
Gm10553J3QPF1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm10553J3QPF1 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.34□□□□□ -0.11
Gm10553J3QPF1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Gm10553J3QPF1 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gm10553J3QPF1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm10553J3QPF1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm10553J3QPF1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm10553J3QPF1 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm10553J3QPF1 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gm10553J3QPF1 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Gm10553J3QPF1 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm10553J3QPF1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Gm10553J3QPF1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Gm10553J3QPF1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm10553J3QPF1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm10553J3QPF1 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Gm10553J3QPF1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Gm10553J3QPF1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm10553J3QPF1 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.32□□□□□ -0.12
Gm10553J3QPF1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.32□□□□□ -0.12
Gm10553J3QPF1 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.32□□□□□ -0.12
Gm10553J3QPF1 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.32□□□□□ -0.12
Gm10553J3QPF1 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm10553J3QPF1 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Gm10553J3QPF1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm10553J3QPF1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm10553J3QPF1 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm10553J3QPF1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm10553J3QPF1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Gm10553J3QPF1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm10553J3QPF1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC14.31□□□□□ -0.12
Gm10553J3QPF1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm10553J3QPF1 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm10553J3QPF1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm10553J3QPF1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm10553J3QPF1 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm10553J3QPF1 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm10553J3QPF1 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm10553J3QPF1 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm10553J3QPF1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm10553J3QPF1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm10553J3QPF1 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm10553J3QPF1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm10553J3QPF1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm10553J3QPF1 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Gm10553J3QPF1 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Gm10553J3QPF1 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Gm10553J3QPF1 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms