Protein–RNA interactions for Protein: E9PXX9

Slc28a1, Sodium/nucleoside cotransporter, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a1E9PXX9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc28a1E9PXX9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc28a1E9PXX9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Slc28a1E9PXX9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
Slc28a1E9PXX9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc28a1E9PXX9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc28a1E9PXX9 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc28a1E9PXX9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc28a1E9PXX9 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc28a1E9PXX9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc28a1E9PXX9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Slc28a1E9PXX9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc28a1E9PXX9 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slc28a1E9PXX9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slc28a1E9PXX9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slc28a1E9PXX9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc28a1E9PXX9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc28a1E9PXX9 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc28a1E9PXX9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc28a1E9PXX9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc28a1E9PXX9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc28a1E9PXX9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
Slc28a1E9PXX9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc28a1E9PXX9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc28a1E9PXX9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc28a1E9PXX9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc28a1E9PXX9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc28a1E9PXX9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc28a1E9PXX9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.72■□□□□ 0.43
Slc28a1E9PXX9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc28a1E9PXX9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc28a1E9PXX9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc28a1E9PXX9 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.72■□□□□ 0.43
Slc28a1E9PXX9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc28a1E9PXX9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc28a1E9PXX9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc28a1E9PXX9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc28a1E9PXX9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc28a1E9PXX9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc28a1E9PXX9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc28a1E9PXX9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc28a1E9PXX9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc28a1E9PXX9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc28a1E9PXX9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Slc28a1E9PXX9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Slc28a1E9PXX9 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc28a1E9PXX9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc28a1E9PXX9 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Slc28a1E9PXX9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc28a1E9PXX9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Slc28a1E9PXX9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.71■□□□□ 0.43
Slc28a1E9PXX9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc28a1E9PXX9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Slc28a1E9PXX9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Slc28a1E9PXX9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc28a1E9PXX9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc28a1E9PXX9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Slc28a1E9PXX9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc28a1E9PXX9 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.7■□□□□ 0.42
Slc28a1E9PXX9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.7■□□□□ 0.42
Slc28a1E9PXX9 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc28a1E9PXX9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc28a1E9PXX9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slc28a1E9PXX9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slc28a1E9PXX9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slc28a1E9PXX9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc28a1E9PXX9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc28a1E9PXX9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc28a1E9PXX9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc28a1E9PXX9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc28a1E9PXX9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc28a1E9PXX9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc28a1E9PXX9 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.69■□□□□ 0.42
Slc28a1E9PXX9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Slc28a1E9PXX9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.69■□□□□ 0.42
Slc28a1E9PXX9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Slc28a1E9PXX9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Slc28a1E9PXX9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Slc28a1E9PXX9 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Slc28a1E9PXX9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc28a1E9PXX9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc28a1E9PXX9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc28a1E9PXX9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Slc28a1E9PXX9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc28a1E9PXX9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc28a1E9PXX9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Slc28a1E9PXX9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Slc28a1E9PXX9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Slc28a1E9PXX9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Slc28a1E9PXX9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Slc28a1E9PXX9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc28a1E9PXX9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.68■□□□□ 0.42
Slc28a1E9PXX9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc28a1E9PXX9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc28a1E9PXX9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc28a1E9PXX9 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc28a1E9PXX9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc28a1E9PXX9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Slc28a1E9PXX9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc28a1E9PXX9 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms