Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igkv8-27A0A0G2JF28 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igkv8-27A0A0G2JF28 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igkv8-27A0A0G2JF28 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Igkv8-27A0A0G2JF28 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igkv8-27A0A0G2JF28 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igkv8-27A0A0G2JF28 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igkv8-27A0A0G2JF28 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Igkv8-27A0A0G2JF28 Shroom3-211ENSMUST00000225438 5742 ntBASIC11.83□□□□□ -0.51
Igkv8-27A0A0G2JF28 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Igkv8-27A0A0G2JF28 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC11.83□□□□□ -0.52
Igkv8-27A0A0G2JF28 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv8-27A0A0G2JF28 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv8-27A0A0G2JF28 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv8-27A0A0G2JF28 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv8-27A0A0G2JF28 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv8-27A0A0G2JF28 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv8-27A0A0G2JF28 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv8-27A0A0G2JF28 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv8-27A0A0G2JF28 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv8-27A0A0G2JF28 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv8-27A0A0G2JF28 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv8-27A0A0G2JF28 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv8-27A0A0G2JF28 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv8-27A0A0G2JF28 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv8-27A0A0G2JF28 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv8-27A0A0G2JF28 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv8-27A0A0G2JF28 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv8-27A0A0G2JF28 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv8-27A0A0G2JF28 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv8-27A0A0G2JF28 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC11.82□□□□□ -0.52
Igkv8-27A0A0G2JF28 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv8-27A0A0G2JF28 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv8-27A0A0G2JF28 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv8-27A0A0G2JF28 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv8-27A0A0G2JF28 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv8-27A0A0G2JF28 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC11.82□□□□□ -0.52
Igkv8-27A0A0G2JF28 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv8-27A0A0G2JF28 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Igkv8-27A0A0G2JF28 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv8-27A0A0G2JF28 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv8-27A0A0G2JF28 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv8-27A0A0G2JF28 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Igkv8-27A0A0G2JF28 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv8-27A0A0G2JF28 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv8-27A0A0G2JF28 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv8-27A0A0G2JF28 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv8-27A0A0G2JF28 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv8-27A0A0G2JF28 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv8-27A0A0G2JF28 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv8-27A0A0G2JF28 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv8-27A0A0G2JF28 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv8-27A0A0G2JF28 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv8-27A0A0G2JF28 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv8-27A0A0G2JF28 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv8-27A0A0G2JF28 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv8-27A0A0G2JF28 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv8-27A0A0G2JF28 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv8-27A0A0G2JF28 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC11.81□□□□□ -0.52
Igkv8-27A0A0G2JF28 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv8-27A0A0G2JF28 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Igkv8-27A0A0G2JF28 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv8-27A0A0G2JF28 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv8-27A0A0G2JF28 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv8-27A0A0G2JF28 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv8-27A0A0G2JF28 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv8-27A0A0G2JF28 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv8-27A0A0G2JF28 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv8-27A0A0G2JF28 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv8-27A0A0G2JF28 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv8-27A0A0G2JF28 Gm15635-204ENSMUST00000208024 2539 ntBASIC11.81□□□□□ -0.52
Igkv8-27A0A0G2JF28 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv8-27A0A0G2JF28 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv8-27A0A0G2JF28 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Igkv8-27A0A0G2JF28 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Igkv8-27A0A0G2JF28 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Igkv8-27A0A0G2JF28 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv8-27A0A0G2JF28 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv8-27A0A0G2JF28 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv8-27A0A0G2JF28 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC11.8□□□□□ -0.52
Igkv8-27A0A0G2JF28 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Igkv8-27A0A0G2JF28 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv8-27A0A0G2JF28 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Igkv8-27A0A0G2JF28 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv8-27A0A0G2JF28 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv8-27A0A0G2JF28 Gm6598-201ENSMUST00000202719 2615 ntBASIC11.8□□□□□ -0.52
Igkv8-27A0A0G2JF28 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Igkv8-27A0A0G2JF28 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Igkv8-27A0A0G2JF28 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv8-27A0A0G2JF28 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC11.8□□□□□ -0.52
Igkv8-27A0A0G2JF28 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Igkv8-27A0A0G2JF28 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv8-27A0A0G2JF28 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv8-27A0A0G2JF28 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Igkv8-27A0A0G2JF28 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC11.79□□□□□ -0.52
Igkv8-27A0A0G2JF28 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Igkv8-27A0A0G2JF28 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Igkv8-27A0A0G2JF28 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Igkv8-27A0A0G2JF28 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Igkv8-27A0A0G2JF28 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms