Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 AL138781.1-201ENST00000566567 1274 ntBASIC19.39■□□□□ 0.69
TRAV17A0A0B4J275 AC133041.1-202ENST00000642053 222 ntBASIC19.39■□□□□ 0.69
TRAV17A0A0B4J275 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV17A0A0B4J275 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV17A0A0B4J275 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV17A0A0B4J275 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV17A0A0B4J275 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV17A0A0B4J275 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV17A0A0B4J275 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
TRAV17A0A0B4J275 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV17A0A0B4J275 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.39■□□□□ 0.69
TRAV17A0A0B4J275 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV17A0A0B4J275 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV17A0A0B4J275 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV17A0A0B4J275 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TRAV17A0A0B4J275 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV17A0A0B4J275 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV17A0A0B4J275 POU5F1P4-201ENST00000413175 1085 ntBASIC19.38■□□□□ 0.69
TRAV17A0A0B4J275 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
TRAV17A0A0B4J275 AC007322.4-201ENST00000509611 723 ntBASIC19.38■□□□□ 0.69
TRAV17A0A0B4J275 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV17A0A0B4J275 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.38■□□□□ 0.69
TRAV17A0A0B4J275 KRT18P6-201ENST00000555540 1265 ntBASIC19.38■□□□□ 0.69
TRAV17A0A0B4J275 AC087742.1-201ENST00000575880 1738 ntBASIC19.38■□□□□ 0.69
TRAV17A0A0B4J275 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TRAV17A0A0B4J275 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV17A0A0B4J275 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.38■□□□□ 0.69
TRAV17A0A0B4J275 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.38■□□□□ 0.69
TRAV17A0A0B4J275 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.37■□□□□ 0.69
TRAV17A0A0B4J275 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV17A0A0B4J275 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.37■□□□□ 0.69
TRAV17A0A0B4J275 AC073210.2-201ENST00000430369 194 ntBASIC19.37■□□□□ 0.69
TRAV17A0A0B4J275 AC069152.1-201ENST00000438030 544 ntBASIC19.37■□□□□ 0.69
TRAV17A0A0B4J275 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV17A0A0B4J275 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV17A0A0B4J275 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.37■□□□□ 0.69
TRAV17A0A0B4J275 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.37■□□□□ 0.69
TRAV17A0A0B4J275 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV17A0A0B4J275 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
TRAV17A0A0B4J275 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV17A0A0B4J275 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV17A0A0B4J275 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.37■□□□□ 0.69
TRAV17A0A0B4J275 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TRAV17A0A0B4J275 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV17A0A0B4J275 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV17A0A0B4J275 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.36■□□□□ 0.69
TRAV17A0A0B4J275 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV17A0A0B4J275 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.36■□□□□ 0.69
TRAV17A0A0B4J275 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV17A0A0B4J275 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.36■□□□□ 0.69
TRAV17A0A0B4J275 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.36■□□□□ 0.69
TRAV17A0A0B4J275 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.36■□□□□ 0.69
TRAV17A0A0B4J275 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.36■□□□□ 0.69
TRAV17A0A0B4J275 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.36■□□□□ 0.69
TRAV17A0A0B4J275 AC008694.1-202ENST00000636953 945 ntBASIC19.36■□□□□ 0.69
TRAV17A0A0B4J275 TMEM191A-211ENST00000637163 1067 ntBASIC19.36■□□□□ 0.69
TRAV17A0A0B4J275 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV17A0A0B4J275 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV17A0A0B4J275 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV17A0A0B4J275 AC068338.2-201ENST00000563278 1430 ntBASIC19.35■□□□□ 0.69
TRAV17A0A0B4J275 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.35■□□□□ 0.69
TRAV17A0A0B4J275 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV17A0A0B4J275 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TRAV17A0A0B4J275 CYP2T1P-201ENST00000432607 1285 ntBASIC19.35■□□□□ 0.69
TRAV17A0A0B4J275 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV17A0A0B4J275 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.35■□□□□ 0.69
TRAV17A0A0B4J275 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.35■□□□□ 0.69
TRAV17A0A0B4J275 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
TRAV17A0A0B4J275 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.35■□□□□ 0.69
TRAV17A0A0B4J275 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV17A0A0B4J275 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV17A0A0B4J275 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.35■□□□□ 0.69
TRAV17A0A0B4J275 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV17A0A0B4J275 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.34■□□□□ 0.69
TRAV17A0A0B4J275 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV17A0A0B4J275 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV17A0A0B4J275 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.34■□□□□ 0.69
TRAV17A0A0B4J275 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.34■□□□□ 0.69
TRAV17A0A0B4J275 MIR4758-201ENST00000577688 71 ntBASIC19.34■□□□□ 0.69
TRAV17A0A0B4J275 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.34■□□□□ 0.69
TRAV17A0A0B4J275 AC069236.1-201ENST00000604339 616 ntBASIC19.34■□□□□ 0.69
TRAV17A0A0B4J275 OR10C1-204ENST00000622521 1039 ntBASIC19.34■□□□□ 0.69
TRAV17A0A0B4J275 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.34■□□□□ 0.69
TRAV17A0A0B4J275 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV17A0A0B4J275 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV17A0A0B4J275 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV17A0A0B4J275 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TRAV17A0A0B4J275 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.34■□□□□ 0.69
TRAV17A0A0B4J275 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV17A0A0B4J275 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV17A0A0B4J275 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV17A0A0B4J275 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV17A0A0B4J275 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV17A0A0B4J275 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRAV17A0A0B4J275 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
TRAV17A0A0B4J275 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRAV17A0A0B4J275 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.33■□□□□ 0.69
TRAV17A0A0B4J275 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
TRAV17A0A0B4J275 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRAV17A0A0B4J275 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms