Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-2A0A075B649 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav13-2A0A075B649 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-2A0A075B649 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-2A0A075B649 Gm6627-201ENSMUST00000218299 2386 ntBASIC12.64□□□□□ -0.39
Trav13-2A0A075B649 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-2A0A075B649 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-2A0A075B649 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-2A0A075B649 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-2A0A075B649 Gm45640-201ENSMUST00000210665 1896 ntBASIC12.64□□□□□ -0.39
Trav13-2A0A075B649 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-2A0A075B649 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav13-2A0A075B649 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC12.64□□□□□ -0.39
Trav13-2A0A075B649 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-2A0A075B649 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-2A0A075B649 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav13-2A0A075B649 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Trav13-2A0A075B649 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Trav13-2A0A075B649 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-2A0A075B649 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-2A0A075B649 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-2A0A075B649 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Trav13-2A0A075B649 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC12.63□□□□□ -0.39
Trav13-2A0A075B649 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-2A0A075B649 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav13-2A0A075B649 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-2A0A075B649 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav13-2A0A075B649 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-2A0A075B649 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-2A0A075B649 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-2A0A075B649 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-2A0A075B649 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-2A0A075B649 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC12.63□□□□□ -0.39
Trav13-2A0A075B649 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav13-2A0A075B649 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-2A0A075B649 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav13-2A0A075B649 Gm7417-201ENSMUST00000192950 473 ntBASIC12.63□□□□□ -0.39
Trav13-2A0A075B649 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-2A0A075B649 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-2A0A075B649 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-2A0A075B649 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Trav13-2A0A075B649 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-2A0A075B649 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-2A0A075B649 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav13-2A0A075B649 Gm18688-201ENSMUST00000204695 1859 ntBASIC12.63□□□□□ -0.39
Trav13-2A0A075B649 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-2A0A075B649 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-2A0A075B649 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-2A0A075B649 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-2A0A075B649 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-2A0A075B649 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-2A0A075B649 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-2A0A075B649 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC12.62□□□□□ -0.39
Trav13-2A0A075B649 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-2A0A075B649 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-2A0A075B649 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav13-2A0A075B649 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-2A0A075B649 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-2A0A075B649 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-2A0A075B649 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-2A0A075B649 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-2A0A075B649 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav13-2A0A075B649 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-2A0A075B649 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-2A0A075B649 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-2A0A075B649 Rarb-207ENSMUST00000225921 2756 ntBASIC12.61□□□□□ -0.39
Trav13-2A0A075B649 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-2A0A075B649 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-2A0A075B649 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav13-2A0A075B649 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav13-2A0A075B649 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-2A0A075B649 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-2A0A075B649 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-2A0A075B649 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav13-2A0A075B649 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-2A0A075B649 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-2A0A075B649 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC12.6□□□□□ -0.39
Trav13-2A0A075B649 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav13-2A0A075B649 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-2A0A075B649 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav13-2A0A075B649 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-2A0A075B649 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-2A0A075B649 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-2A0A075B649 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-2A0A075B649 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-2A0A075B649 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC12.6□□□□□ -0.39
Trav13-2A0A075B649 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Trav13-2A0A075B649 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-2A0A075B649 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-2A0A075B649 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-2A0A075B649 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-2A0A075B649 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-2A0A075B649 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-2A0A075B649 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav13-2A0A075B649 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav13-2A0A075B649 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-2A0A075B649 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-2A0A075B649 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13-2A0A075B649 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13-2A0A075B649 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms