Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Dmtn-210ENSMUST00000228824 2377 ntBASIC13.86□□□□□ -0.19
Trav16d-dv11A0A075B617 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav16d-dv11A0A075B617 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav16d-dv11A0A075B617 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav16d-dv11A0A075B617 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav16d-dv11A0A075B617 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC13.85□□□□□ -0.19
Trav16d-dv11A0A075B617 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Trav16d-dv11A0A075B617 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav16d-dv11A0A075B617 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav16d-dv11A0A075B617 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav16d-dv11A0A075B617 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trav16d-dv11A0A075B617 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav16d-dv11A0A075B617 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav16d-dv11A0A075B617 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Trav16d-dv11A0A075B617 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav16d-dv11A0A075B617 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav16d-dv11A0A075B617 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trav16d-dv11A0A075B617 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav16d-dv11A0A075B617 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav16d-dv11A0A075B617 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav16d-dv11A0A075B617 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav16d-dv11A0A075B617 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav16d-dv11A0A075B617 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav16d-dv11A0A075B617 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav16d-dv11A0A075B617 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav16d-dv11A0A075B617 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav16d-dv11A0A075B617 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav16d-dv11A0A075B617 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav16d-dv11A0A075B617 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav16d-dv11A0A075B617 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav16d-dv11A0A075B617 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC13.84□□□□□ -0.19
Trav16d-dv11A0A075B617 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC13.84□□□□□ -0.19
Trav16d-dv11A0A075B617 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav16d-dv11A0A075B617 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Trav16d-dv11A0A075B617 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav16d-dv11A0A075B617 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav16d-dv11A0A075B617 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav16d-dv11A0A075B617 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav16d-dv11A0A075B617 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav16d-dv11A0A075B617 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav16d-dv11A0A075B617 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav16d-dv11A0A075B617 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav16d-dv11A0A075B617 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Trav16d-dv11A0A075B617 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav16d-dv11A0A075B617 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav16d-dv11A0A075B617 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav16d-dv11A0A075B617 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav16d-dv11A0A075B617 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav16d-dv11A0A075B617 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trav16d-dv11A0A075B617 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC13.83□□□□□ -0.2
Trav16d-dv11A0A075B617 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav16d-dv11A0A075B617 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav16d-dv11A0A075B617 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav16d-dv11A0A075B617 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav16d-dv11A0A075B617 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Trav16d-dv11A0A075B617 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav16d-dv11A0A075B617 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav16d-dv11A0A075B617 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav16d-dv11A0A075B617 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav16d-dv11A0A075B617 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav16d-dv11A0A075B617 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav16d-dv11A0A075B617 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC13.83□□□□□ -0.2
Trav16d-dv11A0A075B617 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav16d-dv11A0A075B617 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav16d-dv11A0A075B617 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav16d-dv11A0A075B617 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav16d-dv11A0A075B617 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav16d-dv11A0A075B617 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav16d-dv11A0A075B617 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav16d-dv11A0A075B617 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav16d-dv11A0A075B617 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav16d-dv11A0A075B617 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC13.82□□□□□ -0.2
Trav16d-dv11A0A075B617 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC13.82□□□□□ -0.2
Trav16d-dv11A0A075B617 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC13.82□□□□□ -0.2
Trav16d-dv11A0A075B617 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav16d-dv11A0A075B617 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav16d-dv11A0A075B617 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav16d-dv11A0A075B617 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav16d-dv11A0A075B617 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav16d-dv11A0A075B617 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav16d-dv11A0A075B617 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav16d-dv11A0A075B617 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav16d-dv11A0A075B617 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav16d-dv11A0A075B617 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav16d-dv11A0A075B617 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav16d-dv11A0A075B617 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav16d-dv11A0A075B617 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav16d-dv11A0A075B617 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav16d-dv11A0A075B617 Gm37352-201ENSMUST00000193908 2181 ntBASIC13.81□□□□□ -0.2
Trav16d-dv11A0A075B617 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav16d-dv11A0A075B617 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav16d-dv11A0A075B617 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav16d-dv11A0A075B617 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav16d-dv11A0A075B617 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trav16d-dv11A0A075B617 Nsd1-203ENSMUST00000224156 1149 ntBASIC13.81□□□□□ -0.2
Trav16d-dv11A0A075B617 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav16d-dv11A0A075B617 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav16d-dv11A0A075B617 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav16d-dv11A0A075B617 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav16d-dv11A0A075B617 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms