Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC13.77□□□□□ -0.21
Trav13d-1A0A075B606 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13d-1A0A075B606 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trav13d-1A0A075B606 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13d-1A0A075B606 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13d-1A0A075B606 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13d-1A0A075B606 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13d-1A0A075B606 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC13.77□□□□□ -0.21
Trav13d-1A0A075B606 Gm7514-201ENSMUST00000209475 934 ntBASIC13.77□□□□□ -0.21
Trav13d-1A0A075B606 Ap3s1-204ENSMUST00000225520 957 ntBASIC13.77□□□□□ -0.21
Trav13d-1A0A075B606 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13d-1A0A075B606 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13d-1A0A075B606 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13d-1A0A075B606 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13d-1A0A075B606 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13d-1A0A075B606 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13d-1A0A075B606 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Trav13d-1A0A075B606 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trav13d-1A0A075B606 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-1A0A075B606 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-1A0A075B606 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trav13d-1A0A075B606 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-1A0A075B606 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-1A0A075B606 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-1A0A075B606 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-1A0A075B606 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-1A0A075B606 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-1A0A075B606 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-1A0A075B606 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-1A0A075B606 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-1A0A075B606 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-1A0A075B606 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-1A0A075B606 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trav13d-1A0A075B606 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-1A0A075B606 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-1A0A075B606 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-1A0A075B606 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
Trav13d-1A0A075B606 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13d-1A0A075B606 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13d-1A0A075B606 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13d-1A0A075B606 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13d-1A0A075B606 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13d-1A0A075B606 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Trav13d-1A0A075B606 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC13.75□□□□□ -0.21
Trav13d-1A0A075B606 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC13.75□□□□□ -0.21
Trav13d-1A0A075B606 Gm43909-201ENSMUST00000203443 1876 ntBASIC13.75□□□□□ -0.21
Trav13d-1A0A075B606 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13d-1A0A075B606 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13d-1A0A075B606 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13d-1A0A075B606 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13d-1A0A075B606 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC13.75□□□□□ -0.21
Trav13d-1A0A075B606 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13d-1A0A075B606 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13d-1A0A075B606 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trav13d-1A0A075B606 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13d-1A0A075B606 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
Trav13d-1A0A075B606 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13d-1A0A075B606 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Trav13d-1A0A075B606 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13d-1A0A075B606 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13d-1A0A075B606 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC13.74□□□□□ -0.21
Trav13d-1A0A075B606 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC13.74□□□□□ -0.21
Trav13d-1A0A075B606 CT030146.1-201ENSMUST00000220919 217 ntBASIC13.74□□□□□ -0.21
Trav13d-1A0A075B606 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13d-1A0A075B606 Spcs1-207ENSMUST00000228767 1008 ntBASIC13.74□□□□□ -0.21
Trav13d-1A0A075B606 Gm10602-201ENSMUST00000098239 609 ntBASIC13.74□□□□□ -0.21
Trav13d-1A0A075B606 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13d-1A0A075B606 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13d-1A0A075B606 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13d-1A0A075B606 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trav13d-1A0A075B606 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13d-1A0A075B606 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13d-1A0A075B606 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13d-1A0A075B606 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trav13d-1A0A075B606 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav13d-1A0A075B606 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13d-1A0A075B606 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13d-1A0A075B606 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13d-1A0A075B606 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13d-1A0A075B606 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Trav13d-1A0A075B606 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trav13d-1A0A075B606 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13d-1A0A075B606 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13d-1A0A075B606 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13d-1A0A075B606 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav13d-1A0A075B606 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13d-1A0A075B606 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Trav13d-1A0A075B606 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav13d-1A0A075B606 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav13d-1A0A075B606 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trav13d-1A0A075B606 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13d-1A0A075B606 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13d-1A0A075B606 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13d-1A0A075B606 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13d-1A0A075B606 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13d-1A0A075B606 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13d-1A0A075B606 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Trav13d-1A0A075B606 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13d-1A0A075B606 Gm38205-201ENSMUST00000192243 258 ntBASIC13.72□□□□□ -0.21
Trav13d-1A0A075B606 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms