Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9-1A0A075B601 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trav9-1A0A075B601 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav9-1A0A075B601 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav9-1A0A075B601 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9-1A0A075B601 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9-1A0A075B601 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9-1A0A075B601 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9-1A0A075B601 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9-1A0A075B601 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9-1A0A075B601 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9-1A0A075B601 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Trav9-1A0A075B601 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC14.67□□□□□ -0.06
Trav9-1A0A075B601 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.67□□□□□ -0.06
Trav9-1A0A075B601 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC14.67□□□□□ -0.06
Trav9-1A0A075B601 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9-1A0A075B601 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9-1A0A075B601 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9-1A0A075B601 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9-1A0A075B601 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9-1A0A075B601 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9-1A0A075B601 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9-1A0A075B601 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.66□□□□□ -0.06
Trav9-1A0A075B601 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9-1A0A075B601 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9-1A0A075B601 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav9-1A0A075B601 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav9-1A0A075B601 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9-1A0A075B601 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.66□□□□□ -0.06
Trav9-1A0A075B601 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9-1A0A075B601 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9-1A0A075B601 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9-1A0A075B601 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9-1A0A075B601 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9-1A0A075B601 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Trav9-1A0A075B601 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav9-1A0A075B601 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9-1A0A075B601 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9-1A0A075B601 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav9-1A0A075B601 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9-1A0A075B601 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9-1A0A075B601 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav9-1A0A075B601 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav9-1A0A075B601 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav9-1A0A075B601 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9-1A0A075B601 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9-1A0A075B601 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9-1A0A075B601 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9-1A0A075B601 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.65□□□□□ -0.06
Trav9-1A0A075B601 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Trav9-1A0A075B601 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Trav9-1A0A075B601 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9-1A0A075B601 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9-1A0A075B601 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9-1A0A075B601 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9-1A0A075B601 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9-1A0A075B601 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9-1A0A075B601 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9-1A0A075B601 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9-1A0A075B601 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trav9-1A0A075B601 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9-1A0A075B601 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9-1A0A075B601 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9-1A0A075B601 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9-1A0A075B601 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9-1A0A075B601 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav9-1A0A075B601 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9-1A0A075B601 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav9-1A0A075B601 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9-1A0A075B601 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9-1A0A075B601 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9-1A0A075B601 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9-1A0A075B601 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9-1A0A075B601 Gm11421-201ENSMUST00000122124 294 ntBASIC14.63□□□□□ -0.07
Trav9-1A0A075B601 Smad6-203ENSMUST00000179458 273 ntBASIC14.63□□□□□ -0.07
Trav9-1A0A075B601 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9-1A0A075B601 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC14.63□□□□□ -0.07
Trav9-1A0A075B601 Gm8493-201ENSMUST00000196881 489 ntBASIC14.63□□□□□ -0.07
Trav9-1A0A075B601 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav9-1A0A075B601 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9-1A0A075B601 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav9-1A0A075B601 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9-1A0A075B601 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9-1A0A075B601 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav9-1A0A075B601 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9-1A0A075B601 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9-1A0A075B601 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
Trav9-1A0A075B601 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Trav9-1A0A075B601 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9-1A0A075B601 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9-1A0A075B601 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav9-1A0A075B601 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trav9-1A0A075B601 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trav9-1A0A075B601 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9-1A0A075B601 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9-1A0A075B601 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9-1A0A075B601 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC14.62□□□□□ -0.07
Trav9-1A0A075B601 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Trav9-1A0A075B601 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9-1A0A075B601 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms