Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trav5-1A0A075B5Z7 Gm6211-202ENSMUST00000167849 925 ntBASIC16.19■□□□□ 0.18
Trav5-1A0A075B5Z7 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.19■□□□□ 0.18
Trav5-1A0A075B5Z7 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.19■□□□□ 0.18
Trav5-1A0A075B5Z7 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.19■□□□□ 0.18
Trav5-1A0A075B5Z7 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.19■□□□□ 0.18
Trav5-1A0A075B5Z7 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.19■□□□□ 0.18
Trav5-1A0A075B5Z7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trav5-1A0A075B5Z7 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav5-1A0A075B5Z7 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
Trav5-1A0A075B5Z7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav5-1A0A075B5Z7 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav5-1A0A075B5Z7 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav5-1A0A075B5Z7 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav5-1A0A075B5Z7 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav5-1A0A075B5Z7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav5-1A0A075B5Z7 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.18■□□□□ 0.18
Trav5-1A0A075B5Z7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.18■□□□□ 0.18
Trav5-1A0A075B5Z7 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav5-1A0A075B5Z7 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav5-1A0A075B5Z7 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav5-1A0A075B5Z7 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav5-1A0A075B5Z7 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav5-1A0A075B5Z7 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trav5-1A0A075B5Z7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav5-1A0A075B5Z7 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.17■□□□□ 0.18
Trav5-1A0A075B5Z7 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav5-1A0A075B5Z7 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav5-1A0A075B5Z7 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trav5-1A0A075B5Z7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav5-1A0A075B5Z7 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav5-1A0A075B5Z7 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.17■□□□□ 0.18
Trav5-1A0A075B5Z7 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav5-1A0A075B5Z7 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav5-1A0A075B5Z7 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav5-1A0A075B5Z7 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav5-1A0A075B5Z7 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.16■□□□□ 0.18
Trav5-1A0A075B5Z7 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.16■□□□□ 0.18
Trav5-1A0A075B5Z7 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav5-1A0A075B5Z7 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trav5-1A0A075B5Z7 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav5-1A0A075B5Z7 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav5-1A0A075B5Z7 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav5-1A0A075B5Z7 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trav5-1A0A075B5Z7 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav5-1A0A075B5Z7 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav5-1A0A075B5Z7 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.16■□□□□ 0.18
Trav5-1A0A075B5Z7 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav5-1A0A075B5Z7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.16■□□□□ 0.18
Trav5-1A0A075B5Z7 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Trav5-1A0A075B5Z7 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav5-1A0A075B5Z7 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav5-1A0A075B5Z7 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav5-1A0A075B5Z7 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav5-1A0A075B5Z7 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav5-1A0A075B5Z7 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav5-1A0A075B5Z7 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav5-1A0A075B5Z7 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.16■□□□□ 0.18
Trav5-1A0A075B5Z7 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trav5-1A0A075B5Z7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav5-1A0A075B5Z7 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav5-1A0A075B5Z7 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trav5-1A0A075B5Z7 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.15■□□□□ 0.18
Trav5-1A0A075B5Z7 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Trav5-1A0A075B5Z7 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav5-1A0A075B5Z7 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav5-1A0A075B5Z7 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav5-1A0A075B5Z7 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav5-1A0A075B5Z7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.15■□□□□ 0.18
Trav5-1A0A075B5Z7 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav5-1A0A075B5Z7 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.15■□□□□ 0.18
Trav5-1A0A075B5Z7 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.15■□□□□ 0.18
Trav5-1A0A075B5Z7 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trav5-1A0A075B5Z7 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav5-1A0A075B5Z7 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trav5-1A0A075B5Z7 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav5-1A0A075B5Z7 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav5-1A0A075B5Z7 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav5-1A0A075B5Z7 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trav5-1A0A075B5Z7 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trav5-1A0A075B5Z7 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav5-1A0A075B5Z7 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav5-1A0A075B5Z7 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav5-1A0A075B5Z7 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav5-1A0A075B5Z7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav5-1A0A075B5Z7 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav5-1A0A075B5Z7 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav5-1A0A075B5Z7 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav5-1A0A075B5Z7 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav5-1A0A075B5Z7 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav5-1A0A075B5Z7 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav5-1A0A075B5Z7 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav5-1A0A075B5Z7 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav5-1A0A075B5Z7 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav5-1A0A075B5Z7 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav5-1A0A075B5Z7 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav5-1A0A075B5Z7 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav5-1A0A075B5Z7 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav5-1A0A075B5Z7 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Trav5-1A0A075B5Z7 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms