Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC24.17■■□□□ 1.46
KDM3AQ9Y4C1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
KDM3AQ9Y4C1 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
KDM3AQ9Y4C1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
KDM3AQ9Y4C1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC24.17■■□□□ 1.46
KDM3AQ9Y4C1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC24.17■■□□□ 1.46
KDM3AQ9Y4C1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
KDM3AQ9Y4C1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
KDM3AQ9Y4C1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC24.17■■□□□ 1.46
KDM3AQ9Y4C1 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC24.17■■□□□ 1.46
KDM3AQ9Y4C1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
KDM3AQ9Y4C1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC24.16■■□□□ 1.46
KDM3AQ9Y4C1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC24.16■■□□□ 1.46
KDM3AQ9Y4C1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
KDM3AQ9Y4C1 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
KDM3AQ9Y4C1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC24.16■■□□□ 1.46
KDM3AQ9Y4C1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC24.16■■□□□ 1.46
KDM3AQ9Y4C1 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
KDM3AQ9Y4C1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
KDM3AQ9Y4C1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
KDM3AQ9Y4C1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
KDM3AQ9Y4C1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
KDM3AQ9Y4C1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC24.15■■□□□ 1.46
KDM3AQ9Y4C1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
KDM3AQ9Y4C1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
KDM3AQ9Y4C1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC24.15■■□□□ 1.46
KDM3AQ9Y4C1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
KDM3AQ9Y4C1 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
KDM3AQ9Y4C1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
KDM3AQ9Y4C1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC24.15■■□□□ 1.46
KDM3AQ9Y4C1 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
KDM3AQ9Y4C1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
KDM3AQ9Y4C1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC24.14■■□□□ 1.46
KDM3AQ9Y4C1 AC090192.1-201ENST00000517740 490 ntBASIC24.14■■□□□ 1.46
KDM3AQ9Y4C1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC24.14■■□□□ 1.46
KDM3AQ9Y4C1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
KDM3AQ9Y4C1 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC24.14■■□□□ 1.46
KDM3AQ9Y4C1 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
KDM3AQ9Y4C1 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC24.14■■□□□ 1.45
KDM3AQ9Y4C1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
KDM3AQ9Y4C1 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC24.14■■□□□ 1.45
KDM3AQ9Y4C1 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC24.14■■□□□ 1.45
KDM3AQ9Y4C1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC24.14■■□□□ 1.45
KDM3AQ9Y4C1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC24.14■■□□□ 1.45
KDM3AQ9Y4C1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
KDM3AQ9Y4C1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
KDM3AQ9Y4C1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
KDM3AQ9Y4C1 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC24.13■■□□□ 1.45
KDM3AQ9Y4C1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
KDM3AQ9Y4C1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
KDM3AQ9Y4C1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC24.13■■□□□ 1.45
KDM3AQ9Y4C1 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
KDM3AQ9Y4C1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC24.13■■□□□ 1.45
KDM3AQ9Y4C1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC24.13■■□□□ 1.45
KDM3AQ9Y4C1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC24.13■■□□□ 1.45
KDM3AQ9Y4C1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC24.13■■□□□ 1.45
KDM3AQ9Y4C1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
KDM3AQ9Y4C1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
KDM3AQ9Y4C1 AP004607.7-201ENST00000527152 1677 ntBASIC24.13■■□□□ 1.45
KDM3AQ9Y4C1 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC24.13■■□□□ 1.45
KDM3AQ9Y4C1 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
KDM3AQ9Y4C1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
KDM3AQ9Y4C1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
KDM3AQ9Y4C1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC24.12■■□□□ 1.45
KDM3AQ9Y4C1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
KDM3AQ9Y4C1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
KDM3AQ9Y4C1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC24.12■■□□□ 1.45
KDM3AQ9Y4C1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
KDM3AQ9Y4C1 FAM99A-202ENST00000538190 1989 ntBASIC24.12■■□□□ 1.45
KDM3AQ9Y4C1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
KDM3AQ9Y4C1 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
KDM3AQ9Y4C1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC24.12■■□□□ 1.45
KDM3AQ9Y4C1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
KDM3AQ9Y4C1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
KDM3AQ9Y4C1 ME3-201ENST00000323418 1068 ntTSL 5 BASIC24.11■■□□□ 1.45
KDM3AQ9Y4C1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
KDM3AQ9Y4C1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC24.11■■□□□ 1.45
KDM3AQ9Y4C1 GXYLT1P2-201ENST00000433312 1230 ntBASIC24.11■■□□□ 1.45
KDM3AQ9Y4C1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC24.11■■□□□ 1.45
KDM3AQ9Y4C1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
KDM3AQ9Y4C1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC24.11■■□□□ 1.45
KDM3AQ9Y4C1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC24.11■■□□□ 1.45
KDM3AQ9Y4C1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
KDM3AQ9Y4C1 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
KDM3AQ9Y4C1 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC24.11■■□□□ 1.45
KDM3AQ9Y4C1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC24.11■■□□□ 1.45
KDM3AQ9Y4C1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
KDM3AQ9Y4C1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
KDM3AQ9Y4C1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
KDM3AQ9Y4C1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
KDM3AQ9Y4C1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC24.1■■□□□ 1.45
KDM3AQ9Y4C1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC24.1■■□□□ 1.45
KDM3AQ9Y4C1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC24.1■■□□□ 1.45
KDM3AQ9Y4C1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC24.1■■□□□ 1.45
KDM3AQ9Y4C1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC24.1■■□□□ 1.45
KDM3AQ9Y4C1 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
KDM3AQ9Y4C1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC24.1■■□□□ 1.45
KDM3AQ9Y4C1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
KDM3AQ9Y4C1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
KDM3AQ9Y4C1 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms