Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
NCKIPSDQ9NZQ3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NCKIPSDQ9NZQ3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.59■■□□□ 1.05
NCKIPSDQ9NZQ3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.59■■□□□ 1.05
NCKIPSDQ9NZQ3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
NCKIPSDQ9NZQ3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.59■■□□□ 1.05
NCKIPSDQ9NZQ3 RARRES2P11-201ENST00000635158 484 ntBASIC21.59■■□□□ 1.05
NCKIPSDQ9NZQ3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
NCKIPSDQ9NZQ3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NCKIPSDQ9NZQ3 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NCKIPSDQ9NZQ3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NCKIPSDQ9NZQ3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NCKIPSDQ9NZQ3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.58■■□□□ 1.05
NCKIPSDQ9NZQ3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NCKIPSDQ9NZQ3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NCKIPSDQ9NZQ3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.58■■□□□ 1.05
NCKIPSDQ9NZQ3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.58■■□□□ 1.05
NCKIPSDQ9NZQ3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.58■■□□□ 1.05
NCKIPSDQ9NZQ3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
NCKIPSDQ9NZQ3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NCKIPSDQ9NZQ3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.58■■□□□ 1.05
NCKIPSDQ9NZQ3 CCDC92B-201ENST00000575506 885 ntBASIC21.58■■□□□ 1.05
NCKIPSDQ9NZQ3 AC010525.1-201ENST00000585559 441 ntBASIC21.58■■□□□ 1.05
NCKIPSDQ9NZQ3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.58■■□□□ 1.05
NCKIPSDQ9NZQ3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NCKIPSDQ9NZQ3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
NCKIPSDQ9NZQ3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NCKIPSDQ9NZQ3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
NCKIPSDQ9NZQ3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.04
NCKIPSDQ9NZQ3 LINC01960-201ENST00000563759 1884 ntBASIC21.58■■□□□ 1.04
NCKIPSDQ9NZQ3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NCKIPSDQ9NZQ3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NCKIPSDQ9NZQ3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NCKIPSDQ9NZQ3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.04
NCKIPSDQ9NZQ3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NCKIPSDQ9NZQ3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.57■■□□□ 1.04
NCKIPSDQ9NZQ3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
NCKIPSDQ9NZQ3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NCKIPSDQ9NZQ3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.57■■□□□ 1.04
NCKIPSDQ9NZQ3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
NCKIPSDQ9NZQ3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.57■■□□□ 1.04
NCKIPSDQ9NZQ3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
NCKIPSDQ9NZQ3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.57■■□□□ 1.04
NCKIPSDQ9NZQ3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NCKIPSDQ9NZQ3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NCKIPSDQ9NZQ3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NCKIPSDQ9NZQ3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
NCKIPSDQ9NZQ3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NCKIPSDQ9NZQ3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NCKIPSDQ9NZQ3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NCKIPSDQ9NZQ3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
NCKIPSDQ9NZQ3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NCKIPSDQ9NZQ3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NCKIPSDQ9NZQ3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.56■■□□□ 1.04
NCKIPSDQ9NZQ3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NCKIPSDQ9NZQ3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
NCKIPSDQ9NZQ3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NCKIPSDQ9NZQ3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.56■■□□□ 1.04
NCKIPSDQ9NZQ3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NCKIPSDQ9NZQ3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NCKIPSDQ9NZQ3 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.56■■□□□ 1.04
NCKIPSDQ9NZQ3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
NCKIPSDQ9NZQ3 TERF1P2-201ENST00000583350 1212 ntBASIC21.56■■□□□ 1.04
NCKIPSDQ9NZQ3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NCKIPSDQ9NZQ3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.56■■□□□ 1.04
NCKIPSDQ9NZQ3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NCKIPSDQ9NZQ3 AL024507.2-201ENST00000606070 2574 ntBASIC21.56■■□□□ 1.04
NCKIPSDQ9NZQ3 FBXW4P1-201ENST00000426721 2239 ntBASIC21.56■■□□□ 1.04
NCKIPSDQ9NZQ3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NCKIPSDQ9NZQ3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NCKIPSDQ9NZQ3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NCKIPSDQ9NZQ3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.55■■□□□ 1.04
NCKIPSDQ9NZQ3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NCKIPSDQ9NZQ3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NCKIPSDQ9NZQ3 AC090192.1-201ENST00000517740 490 ntBASIC21.55■■□□□ 1.04
NCKIPSDQ9NZQ3 KRT18P14-201ENST00000534205 1250 ntBASIC21.55■■□□□ 1.04
NCKIPSDQ9NZQ3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
NCKIPSDQ9NZQ3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
NCKIPSDQ9NZQ3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
NCKIPSDQ9NZQ3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NCKIPSDQ9NZQ3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NCKIPSDQ9NZQ3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.55■■□□□ 1.04
NCKIPSDQ9NZQ3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.55■■□□□ 1.04
NCKIPSDQ9NZQ3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
NCKIPSDQ9NZQ3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
NCKIPSDQ9NZQ3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NCKIPSDQ9NZQ3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.54■■□□□ 1.04
NCKIPSDQ9NZQ3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
NCKIPSDQ9NZQ3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NCKIPSDQ9NZQ3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.54■■□□□ 1.04
NCKIPSDQ9NZQ3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.54■■□□□ 1.04
NCKIPSDQ9NZQ3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
NCKIPSDQ9NZQ3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
NCKIPSDQ9NZQ3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.54■■□□□ 1.04
NCKIPSDQ9NZQ3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.54■■□□□ 1.04
NCKIPSDQ9NZQ3 NTF6G-201ENST00000591094 616 ntBASIC21.54■■□□□ 1.04
NCKIPSDQ9NZQ3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.54■■□□□ 1.04
NCKIPSDQ9NZQ3 AC105233.4-201ENST00000642045 216 ntBASIC21.54■■□□□ 1.04
NCKIPSDQ9NZQ3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
NCKIPSDQ9NZQ3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms