Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.81■□□□□ 0.76
UBQLN3Q9H347 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.81■□□□□ 0.76
UBQLN3Q9H347 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBQLN3Q9H347 MIR6084-201ENST00000622012 110 ntBASIC19.81■□□□□ 0.76
UBQLN3Q9H347 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.81■□□□□ 0.76
UBQLN3Q9H347 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.81■□□□□ 0.76
UBQLN3Q9H347 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBQLN3Q9H347 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBQLN3Q9H347 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBQLN3Q9H347 AL137060.1-201ENST00000618151 2648 ntBASIC19.81■□□□□ 0.76
UBQLN3Q9H347 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.81■□□□□ 0.76
UBQLN3Q9H347 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBQLN3Q9H347 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UBQLN3Q9H347 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
UBQLN3Q9H347 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBQLN3Q9H347 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBQLN3Q9H347 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBQLN3Q9H347 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.8■□□□□ 0.76
UBQLN3Q9H347 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBQLN3Q9H347 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.8■□□□□ 0.76
UBQLN3Q9H347 AC123595.1-201ENST00000440769 1046 ntBASIC19.8■□□□□ 0.76
UBQLN3Q9H347 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.8■□□□□ 0.76
UBQLN3Q9H347 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.8■□□□□ 0.76
UBQLN3Q9H347 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.8■□□□□ 0.76
UBQLN3Q9H347 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBQLN3Q9H347 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UBQLN3Q9H347 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UBQLN3Q9H347 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.8■□□□□ 0.76
UBQLN3Q9H347 OXCT2P1-201ENST00000447263 1535 ntBASIC19.8■□□□□ 0.76
UBQLN3Q9H347 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBQLN3Q9H347 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.8■□□□□ 0.76
UBQLN3Q9H347 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
UBQLN3Q9H347 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
UBQLN3Q9H347 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.79■□□□□ 0.76
UBQLN3Q9H347 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.79■□□□□ 0.76
UBQLN3Q9H347 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBQLN3Q9H347 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
UBQLN3Q9H347 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.79■□□□□ 0.76
UBQLN3Q9H347 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
UBQLN3Q9H347 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBQLN3Q9H347 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.79■□□□□ 0.76
UBQLN3Q9H347 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBQLN3Q9H347 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.79■□□□□ 0.76
UBQLN3Q9H347 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
UBQLN3Q9H347 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
UBQLN3Q9H347 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.79■□□□□ 0.76
UBQLN3Q9H347 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBQLN3Q9H347 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.78■□□□□ 0.76
UBQLN3Q9H347 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBQLN3Q9H347 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBQLN3Q9H347 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBQLN3Q9H347 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBQLN3Q9H347 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBQLN3Q9H347 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBQLN3Q9H347 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBQLN3Q9H347 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBQLN3Q9H347 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.78■□□□□ 0.76
UBQLN3Q9H347 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.78■□□□□ 0.76
UBQLN3Q9H347 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
UBQLN3Q9H347 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBQLN3Q9H347 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBQLN3Q9H347 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
UBQLN3Q9H347 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBQLN3Q9H347 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.77■□□□□ 0.76
UBQLN3Q9H347 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
UBQLN3Q9H347 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBQLN3Q9H347 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.77■□□□□ 0.76
UBQLN3Q9H347 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.77■□□□□ 0.76
UBQLN3Q9H347 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UBQLN3Q9H347 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
UBQLN3Q9H347 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.77■□□□□ 0.76
UBQLN3Q9H347 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.77■□□□□ 0.76
UBQLN3Q9H347 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UBQLN3Q9H347 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.77■□□□□ 0.76
UBQLN3Q9H347 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBQLN3Q9H347 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
UBQLN3Q9H347 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
UBQLN3Q9H347 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
UBQLN3Q9H347 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
UBQLN3Q9H347 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
UBQLN3Q9H347 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBQLN3Q9H347 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBQLN3Q9H347 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBQLN3Q9H347 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.76■□□□□ 0.75
UBQLN3Q9H347 SMUG1P1-201ENST00000590640 811 ntBASIC19.76■□□□□ 0.75
UBQLN3Q9H347 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.76■□□□□ 0.75
UBQLN3Q9H347 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBQLN3Q9H347 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.76■□□□□ 0.75
UBQLN3Q9H347 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBQLN3Q9H347 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBQLN3Q9H347 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBQLN3Q9H347 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBQLN3Q9H347 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.75■□□□□ 0.75
UBQLN3Q9H347 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBQLN3Q9H347 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBQLN3Q9H347 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.75■□□□□ 0.75
UBQLN3Q9H347 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBQLN3Q9H347 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.75■□□□□ 0.75
UBQLN3Q9H347 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.75■□□□□ 0.75
UBQLN3Q9H347 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms