Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Cfap53Q9D439 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cfap53Q9D439 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cfap53Q9D439 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cfap53Q9D439 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Cfap53Q9D439 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.68■□□□□ 0.9
Cfap53Q9D439 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cfap53Q9D439 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cfap53Q9D439 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Cfap53Q9D439 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.67■□□□□ 0.9
Cfap53Q9D439 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cfap53Q9D439 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cfap53Q9D439 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cfap53Q9D439 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cfap53Q9D439 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cfap53Q9D439 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cfap53Q9D439 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cfap53Q9D439 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cfap53Q9D439 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.67■□□□□ 0.9
Cfap53Q9D439 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Cfap53Q9D439 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cfap53Q9D439 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cfap53Q9D439 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cfap53Q9D439 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Cfap53Q9D439 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cfap53Q9D439 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cfap53Q9D439 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cfap53Q9D439 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Cfap53Q9D439 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cfap53Q9D439 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cfap53Q9D439 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Cfap53Q9D439 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cfap53Q9D439 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cfap53Q9D439 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cfap53Q9D439 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.66■□□□□ 0.9
Cfap53Q9D439 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Cfap53Q9D439 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cfap53Q9D439 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cfap53Q9D439 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Cfap53Q9D439 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cfap53Q9D439 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.65■□□□□ 0.9
Cfap53Q9D439 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cfap53Q9D439 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cfap53Q9D439 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Cfap53Q9D439 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cfap53Q9D439 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cfap53Q9D439 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cfap53Q9D439 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.65■□□□□ 0.9
Cfap53Q9D439 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cfap53Q9D439 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.64■□□□□ 0.9
Cfap53Q9D439 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.64■□□□□ 0.9
Cfap53Q9D439 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Cfap53Q9D439 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cfap53Q9D439 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Cfap53Q9D439 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Cfap53Q9D439 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cfap53Q9D439 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cfap53Q9D439 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cfap53Q9D439 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cfap53Q9D439 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cfap53Q9D439 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cfap53Q9D439 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cfap53Q9D439 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cfap53Q9D439 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cfap53Q9D439 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cfap53Q9D439 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Cfap53Q9D439 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cfap53Q9D439 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cfap53Q9D439 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cfap53Q9D439 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cfap53Q9D439 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cfap53Q9D439 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Cfap53Q9D439 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cfap53Q9D439 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cfap53Q9D439 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cfap53Q9D439 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cfap53Q9D439 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cfap53Q9D439 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cfap53Q9D439 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cfap53Q9D439 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Cfap53Q9D439 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cfap53Q9D439 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Cfap53Q9D439 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cfap53Q9D439 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cfap53Q9D439 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Cfap53Q9D439 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cfap53Q9D439 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.62■□□□□ 0.89
Cfap53Q9D439 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.62■□□□□ 0.89
Cfap53Q9D439 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.62■□□□□ 0.89
Cfap53Q9D439 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.62■□□□□ 0.89
Cfap53Q9D439 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cfap53Q9D439 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cfap53Q9D439 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cfap53Q9D439 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cfap53Q9D439 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cfap53Q9D439 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Cfap53Q9D439 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cfap53Q9D439 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cfap53Q9D439 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cfap53Q9D439 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms