Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.86■□□□□ 0.61
Trim42Q9D2H5 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim42Q9D2H5 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim42Q9D2H5 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Trim42Q9D2H5 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim42Q9D2H5 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Trim42Q9D2H5 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim42Q9D2H5 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
Trim42Q9D2H5 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim42Q9D2H5 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim42Q9D2H5 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.85■□□□□ 0.61
Trim42Q9D2H5 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.85■□□□□ 0.61
Trim42Q9D2H5 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim42Q9D2H5 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim42Q9D2H5 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.85■□□□□ 0.61
Trim42Q9D2H5 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Trim42Q9D2H5 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim42Q9D2H5 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim42Q9D2H5 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim42Q9D2H5 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim42Q9D2H5 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim42Q9D2H5 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim42Q9D2H5 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim42Q9D2H5 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim42Q9D2H5 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Trim42Q9D2H5 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim42Q9D2H5 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim42Q9D2H5 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim42Q9D2H5 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim42Q9D2H5 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim42Q9D2H5 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim42Q9D2H5 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Trim42Q9D2H5 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trim42Q9D2H5 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim42Q9D2H5 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Trim42Q9D2H5 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trim42Q9D2H5 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim42Q9D2H5 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim42Q9D2H5 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.83■□□□□ 0.6
Trim42Q9D2H5 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim42Q9D2H5 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim42Q9D2H5 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Trim42Q9D2H5 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim42Q9D2H5 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim42Q9D2H5 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim42Q9D2H5 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim42Q9D2H5 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim42Q9D2H5 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.82■□□□□ 0.6
Trim42Q9D2H5 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Trim42Q9D2H5 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Trim42Q9D2H5 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim42Q9D2H5 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim42Q9D2H5 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.81■□□□□ 0.6
Trim42Q9D2H5 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim42Q9D2H5 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim42Q9D2H5 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.81■□□□□ 0.6
Trim42Q9D2H5 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim42Q9D2H5 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim42Q9D2H5 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim42Q9D2H5 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Trim42Q9D2H5 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim42Q9D2H5 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim42Q9D2H5 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim42Q9D2H5 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim42Q9D2H5 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim42Q9D2H5 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim42Q9D2H5 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.81■□□□□ 0.6
Trim42Q9D2H5 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.81■□□□□ 0.6
Trim42Q9D2H5 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Trim42Q9D2H5 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim42Q9D2H5 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim42Q9D2H5 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.81■□□□□ 0.6
Trim42Q9D2H5 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim42Q9D2H5 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Trim42Q9D2H5 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.81■□□□□ 0.6
Trim42Q9D2H5 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim42Q9D2H5 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim42Q9D2H5 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim42Q9D2H5 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim42Q9D2H5 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.8■□□□□ 0.6
Trim42Q9D2H5 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim42Q9D2H5 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim42Q9D2H5 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim42Q9D2H5 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim42Q9D2H5 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim42Q9D2H5 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim42Q9D2H5 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Trim42Q9D2H5 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim42Q9D2H5 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.8■□□□□ 0.6
Trim42Q9D2H5 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim42Q9D2H5 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim42Q9D2H5 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim42Q9D2H5 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim42Q9D2H5 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.79■□□□□ 0.6
Trim42Q9D2H5 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim42Q9D2H5 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.79■□□□□ 0.6
Trim42Q9D2H5 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim42Q9D2H5 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Trim42Q9D2H5 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim42Q9D2H5 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms