Protein–RNA interactions for Protein: Q9CXZ1

Ndufs4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, mousemouse

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufs4Q9CXZ1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ndufs4Q9CXZ1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ndufs4Q9CXZ1 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ndufs4Q9CXZ1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ndufs4Q9CXZ1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ndufs4Q9CXZ1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ndufs4Q9CXZ1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.02■□□□□ 0.48
Ndufs4Q9CXZ1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ndufs4Q9CXZ1 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.02■□□□□ 0.48
Ndufs4Q9CXZ1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Ndufs4Q9CXZ1 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Ndufs4Q9CXZ1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ndufs4Q9CXZ1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ndufs4Q9CXZ1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ndufs4Q9CXZ1 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Ndufs4Q9CXZ1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ndufs4Q9CXZ1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ndufs4Q9CXZ1 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ndufs4Q9CXZ1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Ndufs4Q9CXZ1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ndufs4Q9CXZ1 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ndufs4Q9CXZ1 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ndufs4Q9CXZ1 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.01■□□□□ 0.47
Ndufs4Q9CXZ1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ndufs4Q9CXZ1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ndufs4Q9CXZ1 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ndufs4Q9CXZ1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ndufs4Q9CXZ1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ndufs4Q9CXZ1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ndufs4Q9CXZ1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18■□□□□ 0.47
Ndufs4Q9CXZ1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ndufs4Q9CXZ1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ndufs4Q9CXZ1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ndufs4Q9CXZ1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ndufs4Q9CXZ1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ndufs4Q9CXZ1 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ndufs4Q9CXZ1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ndufs4Q9CXZ1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ndufs4Q9CXZ1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ndufs4Q9CXZ1 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ndufs4Q9CXZ1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.99■□□□□ 0.47
Ndufs4Q9CXZ1 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.99■□□□□ 0.47
Ndufs4Q9CXZ1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ndufs4Q9CXZ1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Ndufs4Q9CXZ1 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ndufs4Q9CXZ1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.99■□□□□ 0.47
Ndufs4Q9CXZ1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ndufs4Q9CXZ1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ndufs4Q9CXZ1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ndufs4Q9CXZ1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ndufs4Q9CXZ1 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.98■□□□□ 0.47
Ndufs4Q9CXZ1 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.98■□□□□ 0.47
Ndufs4Q9CXZ1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ndufs4Q9CXZ1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ndufs4Q9CXZ1 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ndufs4Q9CXZ1 Gm10033-202ENSMUST00000211874 928 ntBASIC17.98■□□□□ 0.47
Ndufs4Q9CXZ1 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ndufs4Q9CXZ1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.98■□□□□ 0.47
Ndufs4Q9CXZ1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.98■□□□□ 0.47
Ndufs4Q9CXZ1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ndufs4Q9CXZ1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ndufs4Q9CXZ1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ndufs4Q9CXZ1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.98■□□□□ 0.47
Ndufs4Q9CXZ1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ndufs4Q9CXZ1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ndufs4Q9CXZ1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Ndufs4Q9CXZ1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ndufs4Q9CXZ1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.97■□□□□ 0.47
Ndufs4Q9CXZ1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
Ndufs4Q9CXZ1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ndufs4Q9CXZ1 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ndufs4Q9CXZ1 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ndufs4Q9CXZ1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ndufs4Q9CXZ1 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ndufs4Q9CXZ1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ndufs4Q9CXZ1 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ndufs4Q9CXZ1 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ndufs4Q9CXZ1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ndufs4Q9CXZ1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ndufs4Q9CXZ1 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ndufs4Q9CXZ1 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ndufs4Q9CXZ1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Ndufs4Q9CXZ1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ndufs4Q9CXZ1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ndufs4Q9CXZ1 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.96■□□□□ 0.47
Ndufs4Q9CXZ1 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Ndufs4Q9CXZ1 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ndufs4Q9CXZ1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Ndufs4Q9CXZ1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Ndufs4Q9CXZ1 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.96■□□□□ 0.46
Ndufs4Q9CXZ1 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ndufs4Q9CXZ1 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ndufs4Q9CXZ1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ndufs4Q9CXZ1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ndufs4Q9CXZ1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Ndufs4Q9CXZ1 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Ndufs4Q9CXZ1 Gm13146-201ENSMUST00000118508 780 ntBASIC17.95■□□□□ 0.46
Ndufs4Q9CXZ1 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.95■□□□□ 0.46
Ndufs4Q9CXZ1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.95■□□□□ 0.46
Ndufs4Q9CXZ1 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms