Protein–RNA interactions for Protein: Q99NB8

Ubqln4, Ubiquilin-4, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln4Q99NB8 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ubqln4Q99NB8 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubqln4Q99NB8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubqln4Q99NB8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubqln4Q99NB8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubqln4Q99NB8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ubqln4Q99NB8 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ubqln4Q99NB8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubqln4Q99NB8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.14■□□□□ 0.33
Ubqln4Q99NB8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.14■□□□□ 0.33
Ubqln4Q99NB8 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubqln4Q99NB8 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
Ubqln4Q99NB8 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubqln4Q99NB8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ubqln4Q99NB8 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubqln4Q99NB8 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubqln4Q99NB8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubqln4Q99NB8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubqln4Q99NB8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ubqln4Q99NB8 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Ubqln4Q99NB8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubqln4Q99NB8 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubqln4Q99NB8 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubqln4Q99NB8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ubqln4Q99NB8 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.13■□□□□ 0.33
Ubqln4Q99NB8 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubqln4Q99NB8 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubqln4Q99NB8 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
Ubqln4Q99NB8 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubqln4Q99NB8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubqln4Q99NB8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubqln4Q99NB8 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ubqln4Q99NB8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubqln4Q99NB8 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubqln4Q99NB8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubqln4Q99NB8 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.12■□□□□ 0.33
Ubqln4Q99NB8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ubqln4Q99NB8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubqln4Q99NB8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubqln4Q99NB8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ubqln4Q99NB8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubqln4Q99NB8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubqln4Q99NB8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ubqln4Q99NB8 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ubqln4Q99NB8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubqln4Q99NB8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubqln4Q99NB8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
Ubqln4Q99NB8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ubqln4Q99NB8 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubqln4Q99NB8 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Ubqln4Q99NB8 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubqln4Q99NB8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Ubqln4Q99NB8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ubqln4Q99NB8 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubqln4Q99NB8 Gm9988-201ENSMUST00000069786 435 ntBASIC17.11■□□□□ 0.33
Ubqln4Q99NB8 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ubqln4Q99NB8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ubqln4Q99NB8 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubqln4Q99NB8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubqln4Q99NB8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubqln4Q99NB8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubqln4Q99NB8 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubqln4Q99NB8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ubqln4Q99NB8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ubqln4Q99NB8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.1■□□□□ 0.33
Ubqln4Q99NB8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubqln4Q99NB8 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubqln4Q99NB8 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubqln4Q99NB8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubqln4Q99NB8 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ubqln4Q99NB8 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubqln4Q99NB8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubqln4Q99NB8 Gm38205-201ENSMUST00000192243 258 ntBASIC17.1■□□□□ 0.33
Ubqln4Q99NB8 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.1■□□□□ 0.33
Ubqln4Q99NB8 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Ubqln4Q99NB8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ubqln4Q99NB8 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.1■□□□□ 0.33
Ubqln4Q99NB8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ubqln4Q99NB8 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ubqln4Q99NB8 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubqln4Q99NB8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ubqln4Q99NB8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ubqln4Q99NB8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ubqln4Q99NB8 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ubqln4Q99NB8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ubqln4Q99NB8 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ubqln4Q99NB8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubqln4Q99NB8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ubqln4Q99NB8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ubqln4Q99NB8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubqln4Q99NB8 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubqln4Q99NB8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubqln4Q99NB8 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubqln4Q99NB8 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubqln4Q99NB8 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.09■□□□□ 0.33
Ubqln4Q99NB8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubqln4Q99NB8 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ubqln4Q99NB8 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ubqln4Q99NB8 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ubqln4Q99NB8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms