Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Pcdha9Q91Y11 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.12■□□□□ 0.81
Pcdha9Q91Y11 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdha9Q91Y11 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdha9Q91Y11 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdha9Q91Y11 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdha9Q91Y11 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.11■□□□□ 0.81
Pcdha9Q91Y11 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdha9Q91Y11 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.11■□□□□ 0.81
Pcdha9Q91Y11 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdha9Q91Y11 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.11■□□□□ 0.81
Pcdha9Q91Y11 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Pcdha9Q91Y11 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdha9Q91Y11 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdha9Q91Y11 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdha9Q91Y11 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdha9Q91Y11 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdha9Q91Y11 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdha9Q91Y11 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdha9Q91Y11 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdha9Q91Y11 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdha9Q91Y11 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdha9Q91Y11 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdha9Q91Y11 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.1■□□□□ 0.81
Pcdha9Q91Y11 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdha9Q91Y11 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Pcdha9Q91Y11 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdha9Q91Y11 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdha9Q91Y11 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdha9Q91Y11 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdha9Q91Y11 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdha9Q91Y11 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.09■□□□□ 0.81
Pcdha9Q91Y11 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Pcdha9Q91Y11 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdha9Q91Y11 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdha9Q91Y11 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Pcdha9Q91Y11 Gm26571-201ENSMUST00000181399 666 ntBASIC20.09■□□□□ 0.81
Pcdha9Q91Y11 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.09■□□□□ 0.81
Pcdha9Q91Y11 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdha9Q91Y11 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdha9Q91Y11 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdha9Q91Y11 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdha9Q91Y11 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Pcdha9Q91Y11 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdha9Q91Y11 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdha9Q91Y11 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdha9Q91Y11 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdha9Q91Y11 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdha9Q91Y11 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdha9Q91Y11 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdha9Q91Y11 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdha9Q91Y11 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdha9Q91Y11 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdha9Q91Y11 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Pcdha9Q91Y11 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.08■□□□□ 0.81
Pcdha9Q91Y11 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.08■□□□□ 0.81
Pcdha9Q91Y11 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdha9Q91Y11 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdha9Q91Y11 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
Pcdha9Q91Y11 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdha9Q91Y11 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdha9Q91Y11 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdha9Q91Y11 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha9Q91Y11 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha9Q91Y11 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha9Q91Y11 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha9Q91Y11 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha9Q91Y11 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.07■□□□□ 0.8
Pcdha9Q91Y11 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha9Q91Y11 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha9Q91Y11 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha9Q91Y11 Gm7514-201ENSMUST00000209475 934 ntBASIC20.07■□□□□ 0.8
Pcdha9Q91Y11 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha9Q91Y11 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha9Q91Y11 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Pcdha9Q91Y11 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha9Q91Y11 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdha9Q91Y11 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdha9Q91Y11 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdha9Q91Y11 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
Pcdha9Q91Y11 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.06■□□□□ 0.8
Pcdha9Q91Y11 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdha9Q91Y11 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.06■□□□□ 0.8
Pcdha9Q91Y11 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.06■□□□□ 0.8
Pcdha9Q91Y11 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdha9Q91Y11 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Pcdha9Q91Y11 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha9Q91Y11 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha9Q91Y11 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Pcdha9Q91Y11 Gm42569-201ENSMUST00000200539 472 ntBASIC20.05■□□□□ 0.8
Pcdha9Q91Y11 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.05■□□□□ 0.8
Pcdha9Q91Y11 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha9Q91Y11 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha9Q91Y11 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha9Q91Y11 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha9Q91Y11 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.05■□□□□ 0.8
Pcdha9Q91Y11 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha9Q91Y11 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha9Q91Y11 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha9Q91Y11 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms