Protein–RNA interactions for Protein: Q8R3A2

Cdpf1, Cysteine-rich DPF motif domain-containing protein 1, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdpf1Q8R3A2 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdpf1Q8R3A2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdpf1Q8R3A2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdpf1Q8R3A2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdpf1Q8R3A2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdpf1Q8R3A2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdpf1Q8R3A2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdpf1Q8R3A2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC15.66■□□□□ 0.1
Cdpf1Q8R3A2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdpf1Q8R3A2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cdpf1Q8R3A2 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.66■□□□□ 0.1
Cdpf1Q8R3A2 Gm715-201ENSMUST00000117865 831 ntBASIC15.66■□□□□ 0.1
Cdpf1Q8R3A2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdpf1Q8R3A2 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cdpf1Q8R3A2 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.66■□□□□ 0.1
Cdpf1Q8R3A2 Gm2559-201ENSMUST00000201323 363 ntBASIC15.66■□□□□ 0.1
Cdpf1Q8R3A2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdpf1Q8R3A2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cdpf1Q8R3A2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdpf1Q8R3A2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cdpf1Q8R3A2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cdpf1Q8R3A2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdpf1Q8R3A2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdpf1Q8R3A2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdpf1Q8R3A2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdpf1Q8R3A2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdpf1Q8R3A2 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdpf1Q8R3A2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdpf1Q8R3A2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdpf1Q8R3A2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdpf1Q8R3A2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdpf1Q8R3A2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdpf1Q8R3A2 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdpf1Q8R3A2 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.65■□□□□ 0.1
Cdpf1Q8R3A2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.65■□□□□ 0.1
Cdpf1Q8R3A2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdpf1Q8R3A2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Cdpf1Q8R3A2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdpf1Q8R3A2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdpf1Q8R3A2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdpf1Q8R3A2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdpf1Q8R3A2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdpf1Q8R3A2 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Cdpf1Q8R3A2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdpf1Q8R3A2 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Cdpf1Q8R3A2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC15.64■□□□□ 0.09
Cdpf1Q8R3A2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdpf1Q8R3A2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdpf1Q8R3A2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cdpf1Q8R3A2 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdpf1Q8R3A2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdpf1Q8R3A2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdpf1Q8R3A2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cdpf1Q8R3A2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdpf1Q8R3A2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Cdpf1Q8R3A2 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.63■□□□□ 0.09
Cdpf1Q8R3A2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdpf1Q8R3A2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdpf1Q8R3A2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdpf1Q8R3A2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cdpf1Q8R3A2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdpf1Q8R3A2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdpf1Q8R3A2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdpf1Q8R3A2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
Cdpf1Q8R3A2 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdpf1Q8R3A2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdpf1Q8R3A2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cdpf1Q8R3A2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cdpf1Q8R3A2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Cdpf1Q8R3A2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cdpf1Q8R3A2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdpf1Q8R3A2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Cdpf1Q8R3A2 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.62■□□□□ 0.09
Cdpf1Q8R3A2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Cdpf1Q8R3A2 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.62■□□□□ 0.09
Cdpf1Q8R3A2 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.62■□□□□ 0.09
Cdpf1Q8R3A2 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.62■□□□□ 0.09
Cdpf1Q8R3A2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdpf1Q8R3A2 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Cdpf1Q8R3A2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdpf1Q8R3A2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdpf1Q8R3A2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdpf1Q8R3A2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cdpf1Q8R3A2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdpf1Q8R3A2 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.62■□□□□ 0.09
Cdpf1Q8R3A2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cdpf1Q8R3A2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdpf1Q8R3A2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Cdpf1Q8R3A2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdpf1Q8R3A2 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cdpf1Q8R3A2 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.61■□□□□ 0.09
Cdpf1Q8R3A2 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cdpf1Q8R3A2 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.61■□□□□ 0.09
Cdpf1Q8R3A2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cdpf1Q8R3A2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdpf1Q8R3A2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cdpf1Q8R3A2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdpf1Q8R3A2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdpf1Q8R3A2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdpf1Q8R3A2 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms