Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Ubqln1Q8R317 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ubqln1Q8R317 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ubqln1Q8R317 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ubqln1Q8R317 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ubqln1Q8R317 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ubqln1Q8R317 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ubqln1Q8R317 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ubqln1Q8R317 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ubqln1Q8R317 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ubqln1Q8R317 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
Ubqln1Q8R317 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ubqln1Q8R317 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ubqln1Q8R317 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ubqln1Q8R317 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ubqln1Q8R317 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.83■□□□□ 0.44
Ubqln1Q8R317 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ubqln1Q8R317 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.83■□□□□ 0.44
Ubqln1Q8R317 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ubqln1Q8R317 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ubqln1Q8R317 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ubqln1Q8R317 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ubqln1Q8R317 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Ubqln1Q8R317 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ubqln1Q8R317 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ubqln1Q8R317 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ubqln1Q8R317 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ubqln1Q8R317 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ubqln1Q8R317 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ubqln1Q8R317 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Ubqln1Q8R317 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubqln1Q8R317 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ubqln1Q8R317 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubqln1Q8R317 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.82■□□□□ 0.44
Ubqln1Q8R317 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ubqln1Q8R317 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
Ubqln1Q8R317 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubqln1Q8R317 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Ubqln1Q8R317 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.82■□□□□ 0.44
Ubqln1Q8R317 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.82■□□□□ 0.44
Ubqln1Q8R317 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Ubqln1Q8R317 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubqln1Q8R317 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubqln1Q8R317 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.82■□□□□ 0.44
Ubqln1Q8R317 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubqln1Q8R317 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubqln1Q8R317 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ubqln1Q8R317 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ubqln1Q8R317 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ubqln1Q8R317 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Ubqln1Q8R317 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ubqln1Q8R317 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.81■□□□□ 0.44
Ubqln1Q8R317 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.81■□□□□ 0.44
Ubqln1Q8R317 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.81■□□□□ 0.44
Ubqln1Q8R317 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Ubqln1Q8R317 Gm9988-201ENSMUST00000069786 435 ntBASIC17.81■□□□□ 0.44
Ubqln1Q8R317 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
Ubqln1Q8R317 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Ubqln1Q8R317 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ubqln1Q8R317 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ubqln1Q8R317 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Ubqln1Q8R317 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ubqln1Q8R317 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ubqln1Q8R317 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ubqln1Q8R317 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ubqln1Q8R317 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.8■□□□□ 0.44
Ubqln1Q8R317 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Ubqln1Q8R317 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ubqln1Q8R317 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ubqln1Q8R317 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.8■□□□□ 0.44
Ubqln1Q8R317 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.8■□□□□ 0.44
Ubqln1Q8R317 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ubqln1Q8R317 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Ubqln1Q8R317 Gm10493-201ENSMUST00000097270 612 ntBASIC17.8■□□□□ 0.44
Ubqln1Q8R317 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ubqln1Q8R317 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ubqln1Q8R317 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ubqln1Q8R317 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ubqln1Q8R317 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ubqln1Q8R317 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubqln1Q8R317 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubqln1Q8R317 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubqln1Q8R317 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.79■□□□□ 0.44
Ubqln1Q8R317 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ubqln1Q8R317 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubqln1Q8R317 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubqln1Q8R317 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubqln1Q8R317 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubqln1Q8R317 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Ubqln1Q8R317 Gm8495-201ENSMUST00000188740 694 ntBASIC17.79■□□□□ 0.44
Ubqln1Q8R317 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubqln1Q8R317 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubqln1Q8R317 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.79■□□□□ 0.44
Ubqln1Q8R317 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubqln1Q8R317 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubqln1Q8R317 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubqln1Q8R317 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubqln1Q8R317 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubqln1Q8R317 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Ubqln1Q8R317 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms