Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Rtn1Q8K0T0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Rtn1Q8K0T0 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rtn1Q8K0T0 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
Rtn1Q8K0T0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Rtn1Q8K0T0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Rtn1Q8K0T0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rtn1Q8K0T0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Rtn1Q8K0T0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Rtn1Q8K0T0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rtn1Q8K0T0 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rtn1Q8K0T0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rtn1Q8K0T0 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rtn1Q8K0T0 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rtn1Q8K0T0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rtn1Q8K0T0 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rtn1Q8K0T0 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rtn1Q8K0T0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rtn1Q8K0T0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Rtn1Q8K0T0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rtn1Q8K0T0 Gm8495-201ENSMUST00000188740 694 ntBASIC21.8■■□□□ 1.08
Rtn1Q8K0T0 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC21.8■■□□□ 1.08
Rtn1Q8K0T0 Gm18671-201ENSMUST00000214826 683 ntBASIC21.8■■□□□ 1.08
Rtn1Q8K0T0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
Rtn1Q8K0T0 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rtn1Q8K0T0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rtn1Q8K0T0 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Rtn1Q8K0T0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rtn1Q8K0T0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rtn1Q8K0T0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rtn1Q8K0T0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Rtn1Q8K0T0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Rtn1Q8K0T0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Rtn1Q8K0T0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rtn1Q8K0T0 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rtn1Q8K0T0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rtn1Q8K0T0 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rtn1Q8K0T0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.79■■□□□ 1.08
Rtn1Q8K0T0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.79■■□□□ 1.08
Rtn1Q8K0T0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rtn1Q8K0T0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.79■■□□□ 1.08
Rtn1Q8K0T0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
Rtn1Q8K0T0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rtn1Q8K0T0 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rtn1Q8K0T0 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rtn1Q8K0T0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rtn1Q8K0T0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Rtn1Q8K0T0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rtn1Q8K0T0 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rtn1Q8K0T0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rtn1Q8K0T0 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Rtn1Q8K0T0 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC21.78■■□□□ 1.08
Rtn1Q8K0T0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rtn1Q8K0T0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Rtn1Q8K0T0 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Rtn1Q8K0T0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rtn1Q8K0T0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rtn1Q8K0T0 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rtn1Q8K0T0 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.77■■□□□ 1.08
Rtn1Q8K0T0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rtn1Q8K0T0 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rtn1Q8K0T0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rtn1Q8K0T0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rtn1Q8K0T0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Rtn1Q8K0T0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rtn1Q8K0T0 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rtn1Q8K0T0 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC21.76■■□□□ 1.07
Rtn1Q8K0T0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rtn1Q8K0T0 Gm13534-201ENSMUST00000121169 513 ntBASIC21.76■■□□□ 1.07
Rtn1Q8K0T0 Gm26571-201ENSMUST00000181399 666 ntBASIC21.76■■□□□ 1.07
Rtn1Q8K0T0 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rtn1Q8K0T0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Rtn1Q8K0T0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Rtn1Q8K0T0 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rtn1Q8K0T0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rtn1Q8K0T0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rtn1Q8K0T0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rtn1Q8K0T0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rtn1Q8K0T0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC21.75■■□□□ 1.07
Rtn1Q8K0T0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rtn1Q8K0T0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rtn1Q8K0T0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
Rtn1Q8K0T0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.75■■□□□ 1.07
Rtn1Q8K0T0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Rtn1Q8K0T0 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.75■■□□□ 1.07
Rtn1Q8K0T0 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Rtn1Q8K0T0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rtn1Q8K0T0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.75■■□□□ 1.07
Rtn1Q8K0T0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rtn1Q8K0T0 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Rtn1Q8K0T0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Rtn1Q8K0T0 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rtn1Q8K0T0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rtn1Q8K0T0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rtn1Q8K0T0 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rtn1Q8K0T0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Rtn1Q8K0T0 AV356131-201ENSMUST00000206201 750 ntBASIC21.73■■□□□ 1.07
Rtn1Q8K0T0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rtn1Q8K0T0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rtn1Q8K0T0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms