Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC28.43■■■□□ 2.14
CCDC146Q8IYE0 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
CCDC146Q8IYE0 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC28.43■■■□□ 2.14
CCDC146Q8IYE0 AC005224.4-201ENST00000583262 1652 ntBASIC28.43■■■□□ 2.14
CCDC146Q8IYE0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC28.43■■■□□ 2.14
CCDC146Q8IYE0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC28.43■■■□□ 2.14
CCDC146Q8IYE0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
CCDC146Q8IYE0 AC026271.2-201ENST00000428091 497 ntBASIC28.43■■■□□ 2.14
CCDC146Q8IYE0 YBX1P1-201ENST00000445822 960 ntBASIC28.43■■■□□ 2.14
CCDC146Q8IYE0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
CCDC146Q8IYE0 AC010542.4-201ENST00000563151 1910 ntBASIC28.43■■■□□ 2.14
CCDC146Q8IYE0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC28.43■■■□□ 2.14
CCDC146Q8IYE0 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC28.43■■■□□ 2.14
CCDC146Q8IYE0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
CCDC146Q8IYE0 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
CCDC146Q8IYE0 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
CCDC146Q8IYE0 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
CCDC146Q8IYE0 RARRES2P6-201ENST00000567333 442 ntBASIC28.42■■■□□ 2.14
CCDC146Q8IYE0 AC087623.3-201ENST00000607047 1098 ntBASIC28.42■■■□□ 2.14
CCDC146Q8IYE0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC28.42■■■□□ 2.14
CCDC146Q8IYE0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC28.42■■■□□ 2.14
CCDC146Q8IYE0 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
CCDC146Q8IYE0 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
CCDC146Q8IYE0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC28.41■■■□□ 2.14
CCDC146Q8IYE0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC28.41■■■□□ 2.14
CCDC146Q8IYE0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
CCDC146Q8IYE0 AP006587.3-201ENST00000525742 1516 ntBASIC28.41■■■□□ 2.14
CCDC146Q8IYE0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC28.41■■■□□ 2.14
CCDC146Q8IYE0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC28.41■■■□□ 2.14
CCDC146Q8IYE0 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CCDC146Q8IYE0 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC28.4■■■□□ 2.14
CCDC146Q8IYE0 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC28.4■■■□□ 2.14
CCDC146Q8IYE0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC28.4■■■□□ 2.14
CCDC146Q8IYE0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CCDC146Q8IYE0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CCDC146Q8IYE0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CCDC146Q8IYE0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC28.4■■■□□ 2.14
CCDC146Q8IYE0 RAB43-208ENST00000615093 783 ntTSL 5 BASIC28.4■■■□□ 2.14
CCDC146Q8IYE0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CCDC146Q8IYE0 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
CCDC146Q8IYE0 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
CCDC146Q8IYE0 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CCDC146Q8IYE0 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC28.39■■■□□ 2.14
CCDC146Q8IYE0 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
CCDC146Q8IYE0 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
CCDC146Q8IYE0 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
CCDC146Q8IYE0 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC28.39■■■□□ 2.14
CCDC146Q8IYE0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
CCDC146Q8IYE0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.14
CCDC146Q8IYE0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC28.39■■■□□ 2.14
CCDC146Q8IYE0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC28.39■■■□□ 2.14
CCDC146Q8IYE0 CCDC92B-201ENST00000575506 885 ntBASIC28.39■■■□□ 2.14
CCDC146Q8IYE0 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
CCDC146Q8IYE0 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CCDC146Q8IYE0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC28.38■■■□□ 2.13
CCDC146Q8IYE0 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC28.38■■■□□ 2.13
CCDC146Q8IYE0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
CCDC146Q8IYE0 AC055733.4-201ENST00000638462 1354 ntBASIC28.38■■■□□ 2.13
CCDC146Q8IYE0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
CCDC146Q8IYE0 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CCDC146Q8IYE0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CCDC146Q8IYE0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC28.38■■■□□ 2.13
CCDC146Q8IYE0 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CCDC146Q8IYE0 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
CCDC146Q8IYE0 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
CCDC146Q8IYE0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC28.38■■■□□ 2.13
CCDC146Q8IYE0 FBXW4P1-201ENST00000426721 2239 ntBASIC28.38■■■□□ 2.13
CCDC146Q8IYE0 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CCDC146Q8IYE0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CCDC146Q8IYE0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CCDC146Q8IYE0 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC28.37■■■□□ 2.13
CCDC146Q8IYE0 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
CCDC146Q8IYE0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
CCDC146Q8IYE0 AC009237.3-201ENST00000393279 1427 ntBASIC28.37■■■□□ 2.13
CCDC146Q8IYE0 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
CCDC146Q8IYE0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC28.37■■■□□ 2.13
CCDC146Q8IYE0 AL034346.1-201ENST00000568244 1277 ntBASIC28.37■■■□□ 2.13
CCDC146Q8IYE0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
CCDC146Q8IYE0 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
CCDC146Q8IYE0 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC28.37■■■□□ 2.13
CCDC146Q8IYE0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CCDC146Q8IYE0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
CCDC146Q8IYE0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
CCDC146Q8IYE0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CCDC146Q8IYE0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC28.36■■■□□ 2.13
CCDC146Q8IYE0 AC097381.1-201ENST00000429019 1296 ntBASIC28.36■■■□□ 2.13
CCDC146Q8IYE0 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC28.36■■■□□ 2.13
CCDC146Q8IYE0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
CCDC146Q8IYE0 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC28.36■■■□□ 2.13
CCDC146Q8IYE0 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CCDC146Q8IYE0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
CCDC146Q8IYE0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
CCDC146Q8IYE0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
CCDC146Q8IYE0 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CCDC146Q8IYE0 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CCDC146Q8IYE0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CCDC146Q8IYE0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CCDC146Q8IYE0 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC28.35■■■□□ 2.13
CCDC146Q8IYE0 AC123595.1-201ENST00000440769 1046 ntBASIC28.35■■■□□ 2.13
CCDC146Q8IYE0 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms