Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Uba3Q8C878 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Uba3Q8C878 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Uba3Q8C878 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Uba3Q8C878 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Uba3Q8C878 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.88■□□□□ 0.77
Uba3Q8C878 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Uba3Q8C878 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.88■□□□□ 0.77
Uba3Q8C878 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.88■□□□□ 0.77
Uba3Q8C878 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.88■□□□□ 0.77
Uba3Q8C878 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Uba3Q8C878 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Uba3Q8C878 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Uba3Q8C878 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Uba3Q8C878 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Uba3Q8C878 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Uba3Q8C878 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Uba3Q8C878 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Uba3Q8C878 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
Uba3Q8C878 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.87■□□□□ 0.77
Uba3Q8C878 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Uba3Q8C878 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Uba3Q8C878 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Uba3Q8C878 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Uba3Q8C878 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Uba3Q8C878 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Uba3Q8C878 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Uba3Q8C878 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Uba3Q8C878 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Uba3Q8C878 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Uba3Q8C878 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Uba3Q8C878 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Uba3Q8C878 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Uba3Q8C878 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Uba3Q8C878 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Uba3Q8C878 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Uba3Q8C878 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Uba3Q8C878 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Uba3Q8C878 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Uba3Q8C878 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Uba3Q8C878 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Uba3Q8C878 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Uba3Q8C878 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Uba3Q8C878 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Uba3Q8C878 Gm10849-201ENSMUST00000100397 618 ntBASIC19.85■□□□□ 0.77
Uba3Q8C878 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.85■□□□□ 0.77
Uba3Q8C878 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Uba3Q8C878 Gm7514-201ENSMUST00000209475 934 ntBASIC19.85■□□□□ 0.77
Uba3Q8C878 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Uba3Q8C878 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Uba3Q8C878 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.85■□□□□ 0.77
Uba3Q8C878 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Uba3Q8C878 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Uba3Q8C878 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Uba3Q8C878 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Uba3Q8C878 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Uba3Q8C878 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Uba3Q8C878 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Uba3Q8C878 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Uba3Q8C878 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Uba3Q8C878 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Uba3Q8C878 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Uba3Q8C878 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Uba3Q8C878 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.84■□□□□ 0.77
Uba3Q8C878 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.84■□□□□ 0.77
Uba3Q8C878 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.84■□□□□ 0.77
Uba3Q8C878 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
Uba3Q8C878 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.84■□□□□ 0.77
Uba3Q8C878 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Uba3Q8C878 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Uba3Q8C878 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Uba3Q8C878 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Uba3Q8C878 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Uba3Q8C878 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.84■□□□□ 0.77
Uba3Q8C878 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Uba3Q8C878 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Uba3Q8C878 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
Uba3Q8C878 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Uba3Q8C878 Gm13534-201ENSMUST00000121169 513 ntBASIC19.83■□□□□ 0.77
Uba3Q8C878 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Uba3Q8C878 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.83■□□□□ 0.77
Uba3Q8C878 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Uba3Q8C878 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Uba3Q8C878 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Uba3Q8C878 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Uba3Q8C878 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Uba3Q8C878 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.82■□□□□ 0.76
Uba3Q8C878 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Uba3Q8C878 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Uba3Q8C878 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Uba3Q8C878 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Uba3Q8C878 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Uba3Q8C878 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.82■□□□□ 0.76
Uba3Q8C878 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.82■□□□□ 0.76
Uba3Q8C878 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Uba3Q8C878 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Uba3Q8C878 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Uba3Q8C878 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
Uba3Q8C878 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Uba3Q8C878 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms