Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.89■□□□□ 0.61
Pabpc5Q8C7D3 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pabpc5Q8C7D3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pabpc5Q8C7D3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pabpc5Q8C7D3 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pabpc5Q8C7D3 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Pabpc5Q8C7D3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pabpc5Q8C7D3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
Pabpc5Q8C7D3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pabpc5Q8C7D3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.89■□□□□ 0.61
Pabpc5Q8C7D3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Pabpc5Q8C7D3 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pabpc5Q8C7D3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pabpc5Q8C7D3 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pabpc5Q8C7D3 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pabpc5Q8C7D3 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.88■□□□□ 0.61
Pabpc5Q8C7D3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pabpc5Q8C7D3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pabpc5Q8C7D3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.88■□□□□ 0.61
Pabpc5Q8C7D3 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Pabpc5Q8C7D3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Pabpc5Q8C7D3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pabpc5Q8C7D3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pabpc5Q8C7D3 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pabpc5Q8C7D3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Pabpc5Q8C7D3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pabpc5Q8C7D3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pabpc5Q8C7D3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.87■□□□□ 0.61
Pabpc5Q8C7D3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pabpc5Q8C7D3 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pabpc5Q8C7D3 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Pabpc5Q8C7D3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pabpc5Q8C7D3 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pabpc5Q8C7D3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pabpc5Q8C7D3 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pabpc5Q8C7D3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pabpc5Q8C7D3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.86■□□□□ 0.61
Pabpc5Q8C7D3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pabpc5Q8C7D3 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pabpc5Q8C7D3 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.86■□□□□ 0.61
Pabpc5Q8C7D3 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.86■□□□□ 0.61
Pabpc5Q8C7D3 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Pabpc5Q8C7D3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pabpc5Q8C7D3 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Pabpc5Q8C7D3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Pabpc5Q8C7D3 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pabpc5Q8C7D3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Pabpc5Q8C7D3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pabpc5Q8C7D3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.85■□□□□ 0.61
Pabpc5Q8C7D3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pabpc5Q8C7D3 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pabpc5Q8C7D3 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pabpc5Q8C7D3 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Pabpc5Q8C7D3 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.85■□□□□ 0.61
Pabpc5Q8C7D3 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.85■□□□□ 0.61
Pabpc5Q8C7D3 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.85■□□□□ 0.61
Pabpc5Q8C7D3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.85■□□□□ 0.61
Pabpc5Q8C7D3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pabpc5Q8C7D3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pabpc5Q8C7D3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.85■□□□□ 0.61
Pabpc5Q8C7D3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.85■□□□□ 0.61
Pabpc5Q8C7D3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pabpc5Q8C7D3 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pabpc5Q8C7D3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pabpc5Q8C7D3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Pabpc5Q8C7D3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pabpc5Q8C7D3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pabpc5Q8C7D3 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pabpc5Q8C7D3 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Pabpc5Q8C7D3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
Pabpc5Q8C7D3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Pabpc5Q8C7D3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
Pabpc5Q8C7D3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.83■□□□□ 0.61
Pabpc5Q8C7D3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pabpc5Q8C7D3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pabpc5Q8C7D3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Pabpc5Q8C7D3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pabpc5Q8C7D3 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pabpc5Q8C7D3 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pabpc5Q8C7D3 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pabpc5Q8C7D3 Nespas-201ENSMUST00000143738 1083 ntBASIC18.83■□□□□ 0.6
Pabpc5Q8C7D3 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pabpc5Q8C7D3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.83■□□□□ 0.6
Pabpc5Q8C7D3 Gm38205-201ENSMUST00000192243 258 ntBASIC18.83■□□□□ 0.6
Pabpc5Q8C7D3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pabpc5Q8C7D3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Pabpc5Q8C7D3 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pabpc5Q8C7D3 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pabpc5Q8C7D3 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pabpc5Q8C7D3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pabpc5Q8C7D3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pabpc5Q8C7D3 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pabpc5Q8C7D3 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.82■□□□□ 0.6
Pabpc5Q8C7D3 Gm7860-201ENSMUST00000121190 879 ntBASIC18.82■□□□□ 0.6
Pabpc5Q8C7D3 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pabpc5Q8C7D3 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Pabpc5Q8C7D3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pabpc5Q8C7D3 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pabpc5Q8C7D3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pabpc5Q8C7D3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms