Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tsen54Q8C2A2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tsen54Q8C2A2 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tsen54Q8C2A2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tsen54Q8C2A2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tsen54Q8C2A2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tsen54Q8C2A2 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tsen54Q8C2A2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC15.77■□□□□ 0.12
Tsen54Q8C2A2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.77■□□□□ 0.12
Tsen54Q8C2A2 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tsen54Q8C2A2 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.77■□□□□ 0.11
Tsen54Q8C2A2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tsen54Q8C2A2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tsen54Q8C2A2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tsen54Q8C2A2 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Tsen54Q8C2A2 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Tsen54Q8C2A2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tsen54Q8C2A2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tsen54Q8C2A2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tsen54Q8C2A2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tsen54Q8C2A2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Tsen54Q8C2A2 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tsen54Q8C2A2 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tsen54Q8C2A2 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tsen54Q8C2A2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tsen54Q8C2A2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tsen54Q8C2A2 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Tsen54Q8C2A2 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tsen54Q8C2A2 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tsen54Q8C2A2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tsen54Q8C2A2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Tsen54Q8C2A2 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tsen54Q8C2A2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.75■□□□□ 0.11
Tsen54Q8C2A2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tsen54Q8C2A2 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tsen54Q8C2A2 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tsen54Q8C2A2 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.75■□□□□ 0.11
Tsen54Q8C2A2 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Tsen54Q8C2A2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tsen54Q8C2A2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Tsen54Q8C2A2 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Tsen54Q8C2A2 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Tsen54Q8C2A2 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC15.75■□□□□ 0.11
Tsen54Q8C2A2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC15.75■□□□□ 0.11
Tsen54Q8C2A2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
Tsen54Q8C2A2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC15.75■□□□□ 0.11
Tsen54Q8C2A2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tsen54Q8C2A2 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.75■□□□□ 0.11
Tsen54Q8C2A2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Tsen54Q8C2A2 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tsen54Q8C2A2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tsen54Q8C2A2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tsen54Q8C2A2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Tsen54Q8C2A2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tsen54Q8C2A2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tsen54Q8C2A2 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tsen54Q8C2A2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tsen54Q8C2A2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tsen54Q8C2A2 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Tsen54Q8C2A2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tsen54Q8C2A2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tsen54Q8C2A2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tsen54Q8C2A2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC15.74■□□□□ 0.11
Tsen54Q8C2A2 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tsen54Q8C2A2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tsen54Q8C2A2 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.74■□□□□ 0.11
Tsen54Q8C2A2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Tsen54Q8C2A2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Tsen54Q8C2A2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tsen54Q8C2A2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tsen54Q8C2A2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tsen54Q8C2A2 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tsen54Q8C2A2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tsen54Q8C2A2 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tsen54Q8C2A2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tsen54Q8C2A2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tsen54Q8C2A2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.73■□□□□ 0.11
Tsen54Q8C2A2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tsen54Q8C2A2 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC15.73■□□□□ 0.11
Tsen54Q8C2A2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tsen54Q8C2A2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tsen54Q8C2A2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Tsen54Q8C2A2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.73■□□□□ 0.11
Tsen54Q8C2A2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tsen54Q8C2A2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tsen54Q8C2A2 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tsen54Q8C2A2 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Tsen54Q8C2A2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.73■□□□□ 0.11
Tsen54Q8C2A2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Tsen54Q8C2A2 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tsen54Q8C2A2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Tsen54Q8C2A2 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tsen54Q8C2A2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.72■□□□□ 0.11
Tsen54Q8C2A2 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.72■□□□□ 0.11
Tsen54Q8C2A2 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.72■□□□□ 0.11
Tsen54Q8C2A2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tsen54Q8C2A2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Tsen54Q8C2A2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tsen54Q8C2A2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tsen54Q8C2A2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms