Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn3bQ8BHK2 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.61■□□□□ 0.41
Scn3bQ8BHK2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn3bQ8BHK2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
Scn3bQ8BHK2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scn3bQ8BHK2 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.61■□□□□ 0.41
Scn3bQ8BHK2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn3bQ8BHK2 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Scn3bQ8BHK2 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.6■□□□□ 0.41
Scn3bQ8BHK2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn3bQ8BHK2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn3bQ8BHK2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn3bQ8BHK2 Gm13238-201ENSMUST00000117655 780 ntBASIC17.6■□□□□ 0.41
Scn3bQ8BHK2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.6■□□□□ 0.41
Scn3bQ8BHK2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.6■□□□□ 0.41
Scn3bQ8BHK2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.6■□□□□ 0.41
Scn3bQ8BHK2 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.6■□□□□ 0.41
Scn3bQ8BHK2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.6■□□□□ 0.41
Scn3bQ8BHK2 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.6■□□□□ 0.41
Scn3bQ8BHK2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn3bQ8BHK2 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.6■□□□□ 0.41
Scn3bQ8BHK2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn3bQ8BHK2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.59■□□□□ 0.41
Scn3bQ8BHK2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn3bQ8BHK2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn3bQ8BHK2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn3bQ8BHK2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn3bQ8BHK2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scn3bQ8BHK2 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn3bQ8BHK2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn3bQ8BHK2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn3bQ8BHK2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scn3bQ8BHK2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn3bQ8BHK2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.59■□□□□ 0.41
Scn3bQ8BHK2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn3bQ8BHK2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.59■□□□□ 0.41
Scn3bQ8BHK2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn3bQ8BHK2 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn3bQ8BHK2 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn3bQ8BHK2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn3bQ8BHK2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn3bQ8BHK2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scn3bQ8BHK2 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scn3bQ8BHK2 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.58■□□□□ 0.41
Scn3bQ8BHK2 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn3bQ8BHK2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Scn3bQ8BHK2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn3bQ8BHK2 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.58■□□□□ 0.4
Scn3bQ8BHK2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn3bQ8BHK2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.58■□□□□ 0.4
Scn3bQ8BHK2 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn3bQ8BHK2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn3bQ8BHK2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn3bQ8BHK2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.58■□□□□ 0.4
Scn3bQ8BHK2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn3bQ8BHK2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Scn3bQ8BHK2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
Scn3bQ8BHK2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn3bQ8BHK2 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn3bQ8BHK2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn3bQ8BHK2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Scn3bQ8BHK2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn3bQ8BHK2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn3bQ8BHK2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn3bQ8BHK2 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn3bQ8BHK2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn3bQ8BHK2 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Scn3bQ8BHK2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn3bQ8BHK2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn3bQ8BHK2 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Scn3bQ8BHK2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Scn3bQ8BHK2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn3bQ8BHK2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Scn3bQ8BHK2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn3bQ8BHK2 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn3bQ8BHK2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn3bQ8BHK2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Scn3bQ8BHK2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn3bQ8BHK2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Scn3bQ8BHK2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.56■□□□□ 0.4
Scn3bQ8BHK2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.56■□□□□ 0.4
Scn3bQ8BHK2 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Scn3bQ8BHK2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn3bQ8BHK2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Scn3bQ8BHK2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn3bQ8BHK2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn3bQ8BHK2 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Scn3bQ8BHK2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn3bQ8BHK2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Scn3bQ8BHK2 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.55■□□□□ 0.4
Scn3bQ8BHK2 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn3bQ8BHK2 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn3bQ8BHK2 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scn3bQ8BHK2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn3bQ8BHK2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn3bQ8BHK2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn3bQ8BHK2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn3bQ8BHK2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn3bQ8BHK2 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Scn3bQ8BHK2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms