Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.48■□□□□ 0.87
Depdc1bQ8BH88 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Depdc1bQ8BH88 Gm29257-201ENSMUST00000186115 639 ntBASIC20.48■□□□□ 0.87
Depdc1bQ8BH88 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.48■□□□□ 0.87
Depdc1bQ8BH88 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Depdc1bQ8BH88 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Depdc1bQ8BH88 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Depdc1bQ8BH88 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Depdc1bQ8BH88 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Depdc1bQ8BH88 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Depdc1bQ8BH88 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Depdc1bQ8BH88 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Depdc1bQ8BH88 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Depdc1bQ8BH88 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Depdc1bQ8BH88 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Depdc1bQ8BH88 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Depdc1bQ8BH88 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.47■□□□□ 0.87
Depdc1bQ8BH88 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Depdc1bQ8BH88 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Depdc1bQ8BH88 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Depdc1bQ8BH88 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Depdc1bQ8BH88 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Depdc1bQ8BH88 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Depdc1bQ8BH88 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Depdc1bQ8BH88 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Depdc1bQ8BH88 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Depdc1bQ8BH88 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Depdc1bQ8BH88 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Depdc1bQ8BH88 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Depdc1bQ8BH88 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Depdc1bQ8BH88 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Depdc1bQ8BH88 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Depdc1bQ8BH88 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Depdc1bQ8BH88 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.46■□□□□ 0.87
Depdc1bQ8BH88 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Depdc1bQ8BH88 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Depdc1bQ8BH88 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
Depdc1bQ8BH88 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Depdc1bQ8BH88 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.46■□□□□ 0.87
Depdc1bQ8BH88 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Depdc1bQ8BH88 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Depdc1bQ8BH88 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.46■□□□□ 0.87
Depdc1bQ8BH88 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Depdc1bQ8BH88 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Depdc1bQ8BH88 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Depdc1bQ8BH88 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.46■□□□□ 0.87
Depdc1bQ8BH88 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Depdc1bQ8BH88 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Depdc1bQ8BH88 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Depdc1bQ8BH88 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Depdc1bQ8BH88 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.45■□□□□ 0.86
Depdc1bQ8BH88 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.45■□□□□ 0.86
Depdc1bQ8BH88 Gm10033-202ENSMUST00000211874 928 ntBASIC20.45■□□□□ 0.86
Depdc1bQ8BH88 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
Depdc1bQ8BH88 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.45■□□□□ 0.86
Depdc1bQ8BH88 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Depdc1bQ8BH88 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.44■□□□□ 0.86
Depdc1bQ8BH88 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Depdc1bQ8BH88 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Depdc1bQ8BH88 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Depdc1bQ8BH88 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Depdc1bQ8BH88 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Depdc1bQ8BH88 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.44■□□□□ 0.86
Depdc1bQ8BH88 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.44■□□□□ 0.86
Depdc1bQ8BH88 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Depdc1bQ8BH88 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Depdc1bQ8BH88 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Depdc1bQ8BH88 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.44■□□□□ 0.86
Depdc1bQ8BH88 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Depdc1bQ8BH88 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Depdc1bQ8BH88 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
Depdc1bQ8BH88 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Depdc1bQ8BH88 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Depdc1bQ8BH88 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Depdc1bQ8BH88 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Depdc1bQ8BH88 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Depdc1bQ8BH88 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Depdc1bQ8BH88 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Depdc1bQ8BH88 Gm42778-201ENSMUST00000199644 553 ntBASIC20.43■□□□□ 0.86
Depdc1bQ8BH88 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Depdc1bQ8BH88 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Depdc1bQ8BH88 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Depdc1bQ8BH88 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Depdc1bQ8BH88 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Depdc1bQ8BH88 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Depdc1bQ8BH88 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Depdc1bQ8BH88 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.43■□□□□ 0.86
Depdc1bQ8BH88 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Depdc1bQ8BH88 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Depdc1bQ8BH88 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Depdc1bQ8BH88 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Depdc1bQ8BH88 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Depdc1bQ8BH88 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Depdc1bQ8BH88 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.42■□□□□ 0.86
Depdc1bQ8BH88 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Depdc1bQ8BH88 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Depdc1bQ8BH88 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.42■□□□□ 0.86
Depdc1bQ8BH88 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Depdc1bQ8BH88 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Depdc1bQ8BH88 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms