Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Slc5a7Q8BGY9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc5a7Q8BGY9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc5a7Q8BGY9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc5a7Q8BGY9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc5a7Q8BGY9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Slc5a7Q8BGY9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc5a7Q8BGY9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc5a7Q8BGY9 Gm13238-201ENSMUST00000117655 780 ntBASIC16.57■□□□□ 0.24
Slc5a7Q8BGY9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.57■□□□□ 0.24
Slc5a7Q8BGY9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.57■□□□□ 0.24
Slc5a7Q8BGY9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc5a7Q8BGY9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Slc5a7Q8BGY9 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.57■□□□□ 0.24
Slc5a7Q8BGY9 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Slc5a7Q8BGY9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc5a7Q8BGY9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc5a7Q8BGY9 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Slc5a7Q8BGY9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc5a7Q8BGY9 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Slc5a7Q8BGY9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc5a7Q8BGY9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc5a7Q8BGY9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Slc5a7Q8BGY9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.56■□□□□ 0.24
Slc5a7Q8BGY9 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc5a7Q8BGY9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Slc5a7Q8BGY9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc5a7Q8BGY9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc5a7Q8BGY9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.56■□□□□ 0.24
Slc5a7Q8BGY9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc5a7Q8BGY9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Slc5a7Q8BGY9 Etf1-202ENSMUST00000180351 108 ntBASIC16.56■□□□□ 0.24
Slc5a7Q8BGY9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.56■□□□□ 0.24
Slc5a7Q8BGY9 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc5a7Q8BGY9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Slc5a7Q8BGY9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Slc5a7Q8BGY9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc5a7Q8BGY9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc5a7Q8BGY9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Slc5a7Q8BGY9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc5a7Q8BGY9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc5a7Q8BGY9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Slc5a7Q8BGY9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Slc5a7Q8BGY9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Slc5a7Q8BGY9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc5a7Q8BGY9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.55■□□□□ 0.24
Slc5a7Q8BGY9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc5a7Q8BGY9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Slc5a7Q8BGY9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc5a7Q8BGY9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Slc5a7Q8BGY9 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.55■□□□□ 0.24
Slc5a7Q8BGY9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc5a7Q8BGY9 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.54■□□□□ 0.24
Slc5a7Q8BGY9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Slc5a7Q8BGY9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc5a7Q8BGY9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Slc5a7Q8BGY9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc5a7Q8BGY9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc5a7Q8BGY9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.54■□□□□ 0.24
Slc5a7Q8BGY9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Slc5a7Q8BGY9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Slc5a7Q8BGY9 Gm9870-201ENSMUST00000063874 645 ntBASIC16.54■□□□□ 0.24
Slc5a7Q8BGY9 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc5a7Q8BGY9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Slc5a7Q8BGY9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
Slc5a7Q8BGY9 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc5a7Q8BGY9 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.54■□□□□ 0.24
Slc5a7Q8BGY9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc5a7Q8BGY9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc5a7Q8BGY9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Slc5a7Q8BGY9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.53■□□□□ 0.24
Slc5a7Q8BGY9 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.53■□□□□ 0.24
Slc5a7Q8BGY9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc5a7Q8BGY9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Slc5a7Q8BGY9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc5a7Q8BGY9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Slc5a7Q8BGY9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc5a7Q8BGY9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.52■□□□□ 0.24
Slc5a7Q8BGY9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc5a7Q8BGY9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc5a7Q8BGY9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc5a7Q8BGY9 Gm43566-201ENSMUST00000196851 808 ntBASIC16.52■□□□□ 0.24
Slc5a7Q8BGY9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc5a7Q8BGY9 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc5a7Q8BGY9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Slc5a7Q8BGY9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Slc5a7Q8BGY9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Slc5a7Q8BGY9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Slc5a7Q8BGY9 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.52■□□□□ 0.23
Slc5a7Q8BGY9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Slc5a7Q8BGY9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Slc5a7Q8BGY9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Slc5a7Q8BGY9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc5a7Q8BGY9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc5a7Q8BGY9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc5a7Q8BGY9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc5a7Q8BGY9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.51■□□□□ 0.23
Slc5a7Q8BGY9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.51■□□□□ 0.23
Slc5a7Q8BGY9 Mir6538-201ENSMUST00000183713 110 ntBASIC16.51■□□□□ 0.23
Slc5a7Q8BGY9 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms