Protein–RNA interactions for Protein: Q8BFS6

Cpped1, Serine/threonine-protein phosphatase CPPED1, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpped1Q8BFS6 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cpped1Q8BFS6 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpped1Q8BFS6 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpped1Q8BFS6 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Cpped1Q8BFS6 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cpped1Q8BFS6 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpped1Q8BFS6 Gm42778-201ENSMUST00000199644 553 ntBASIC18.46■□□□□ 0.55
Cpped1Q8BFS6 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.46■□□□□ 0.55
Cpped1Q8BFS6 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.46■□□□□ 0.55
Cpped1Q8BFS6 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpped1Q8BFS6 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
Cpped1Q8BFS6 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpped1Q8BFS6 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpped1Q8BFS6 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.46■□□□□ 0.55
Cpped1Q8BFS6 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cpped1Q8BFS6 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.45■□□□□ 0.54
Cpped1Q8BFS6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpped1Q8BFS6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.45■□□□□ 0.54
Cpped1Q8BFS6 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Cpped1Q8BFS6 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.45■□□□□ 0.54
Cpped1Q8BFS6 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpped1Q8BFS6 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.45■□□□□ 0.54
Cpped1Q8BFS6 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Cpped1Q8BFS6 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpped1Q8BFS6 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Cpped1Q8BFS6 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Cpped1Q8BFS6 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpped1Q8BFS6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpped1Q8BFS6 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cpped1Q8BFS6 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cpped1Q8BFS6 Gm42642-201ENSMUST00000200683 355 ntBASIC18.44■□□□□ 0.54
Cpped1Q8BFS6 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpped1Q8BFS6 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.44■□□□□ 0.54
Cpped1Q8BFS6 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpped1Q8BFS6 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.44■□□□□ 0.54
Cpped1Q8BFS6 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpped1Q8BFS6 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.44■□□□□ 0.54
Cpped1Q8BFS6 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.44■□□□□ 0.54
Cpped1Q8BFS6 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Cpped1Q8BFS6 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpped1Q8BFS6 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpped1Q8BFS6 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Cpped1Q8BFS6 Reep4-203ENSMUST00000226563 1444 ntBASIC18.43■□□□□ 0.54
Cpped1Q8BFS6 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpped1Q8BFS6 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Cpped1Q8BFS6 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpped1Q8BFS6 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpped1Q8BFS6 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Cpped1Q8BFS6 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpped1Q8BFS6 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cpped1Q8BFS6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpped1Q8BFS6 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpped1Q8BFS6 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpped1Q8BFS6 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpped1Q8BFS6 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpped1Q8BFS6 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpped1Q8BFS6 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpped1Q8BFS6 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpped1Q8BFS6 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Cpped1Q8BFS6 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.42■□□□□ 0.54
Cpped1Q8BFS6 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpped1Q8BFS6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpped1Q8BFS6 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpped1Q8BFS6 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpped1Q8BFS6 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
Cpped1Q8BFS6 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cpped1Q8BFS6 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpped1Q8BFS6 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpped1Q8BFS6 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.41■□□□□ 0.54
Cpped1Q8BFS6 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpped1Q8BFS6 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Cpped1Q8BFS6 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cpped1Q8BFS6 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.41■□□□□ 0.54
Cpped1Q8BFS6 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Cpped1Q8BFS6 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpped1Q8BFS6 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpped1Q8BFS6 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpped1Q8BFS6 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpped1Q8BFS6 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpped1Q8BFS6 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpped1Q8BFS6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cpped1Q8BFS6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpped1Q8BFS6 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cpped1Q8BFS6 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpped1Q8BFS6 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Cpped1Q8BFS6 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.4■□□□□ 0.54
Cpped1Q8BFS6 Gm18671-201ENSMUST00000214826 683 ntBASIC18.4■□□□□ 0.54
Cpped1Q8BFS6 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpped1Q8BFS6 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Cpped1Q8BFS6 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cpped1Q8BFS6 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpped1Q8BFS6 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpped1Q8BFS6 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.4■□□□□ 0.54
Cpped1Q8BFS6 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpped1Q8BFS6 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpped1Q8BFS6 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpped1Q8BFS6 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpped1Q8BFS6 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpped1Q8BFS6 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Cpped1Q8BFS6 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms