Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 SUDS3P1-201ENST00000505831 966 ntBASIC21.37■■□□□ 1.01
LDB1Q86U70 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LDB1Q86U70 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.37■■□□□ 1.01
LDB1Q86U70 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
LDB1Q86U70 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
LDB1Q86U70 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
LDB1Q86U70 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LDB1Q86U70 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.37■■□□□ 1.01
LDB1Q86U70 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LDB1Q86U70 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LDB1Q86U70 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.36■■□□□ 1.01
LDB1Q86U70 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
LDB1Q86U70 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LDB1Q86U70 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
LDB1Q86U70 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LDB1Q86U70 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.36■■□□□ 1.01
LDB1Q86U70 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LDB1Q86U70 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LDB1Q86U70 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
LDB1Q86U70 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.36■■□□□ 1.01
LDB1Q86U70 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.36■■□□□ 1.01
LDB1Q86U70 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.36■■□□□ 1.01
LDB1Q86U70 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LDB1Q86U70 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LDB1Q86U70 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LDB1Q86U70 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
LDB1Q86U70 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LDB1Q86U70 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LDB1Q86U70 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LDB1Q86U70 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
LDB1Q86U70 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LDB1Q86U70 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LDB1Q86U70 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.35■■□□□ 1.01
LDB1Q86U70 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.35■■□□□ 1.01
LDB1Q86U70 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LDB1Q86U70 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.35■■□□□ 1.01
LDB1Q86U70 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.35■■□□□ 1.01
LDB1Q86U70 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
LDB1Q86U70 RASA4CP-201ENST00000424092 1398 ntBASIC21.35■■□□□ 1.01
LDB1Q86U70 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LDB1Q86U70 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LDB1Q86U70 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
LDB1Q86U70 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LDB1Q86U70 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LDB1Q86U70 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LDB1Q86U70 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.34■■□□□ 1.01
LDB1Q86U70 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LDB1Q86U70 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.34■■□□□ 1.01
LDB1Q86U70 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.34■■□□□ 1.01
LDB1Q86U70 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.34■■□□□ 1.01
LDB1Q86U70 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.34■■□□□ 1.01
LDB1Q86U70 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LDB1Q86U70 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LDB1Q86U70 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
LDB1Q86U70 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.33■■□□□ 1.01
LDB1Q86U70 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
LDB1Q86U70 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LDB1Q86U70 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
LDB1Q86U70 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LDB1Q86U70 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.33■■□□□ 1.01
LDB1Q86U70 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LDB1Q86U70 AC091305.1-201ENST00000479476 895 ntBASIC21.33■■□□□ 1.01
LDB1Q86U70 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LDB1Q86U70 AC026310.3-201ENST00000625186 2373 ntBASIC21.33■■□□□ 1
LDB1Q86U70 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
LDB1Q86U70 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
LDB1Q86U70 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.33■■□□□ 1
LDB1Q86U70 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.33■■□□□ 1
LDB1Q86U70 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.32■■□□□ 1
LDB1Q86U70 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.32■■□□□ 1
LDB1Q86U70 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LDB1Q86U70 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.32■■□□□ 1
LDB1Q86U70 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
LDB1Q86U70 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.32■■□□□ 1
LDB1Q86U70 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.32■■□□□ 1
LDB1Q86U70 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.32■■□□□ 1
LDB1Q86U70 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LDB1Q86U70 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LDB1Q86U70 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.32■■□□□ 1
LDB1Q86U70 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LDB1Q86U70 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
LDB1Q86U70 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.32■■□□□ 1
LDB1Q86U70 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LDB1Q86U70 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LDB1Q86U70 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.31■■□□□ 1
LDB1Q86U70 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.31■■□□□ 1
LDB1Q86U70 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.31■■□□□ 1
LDB1Q86U70 AC142381.2-201ENST00000566120 298 ntBASIC21.31■■□□□ 1
LDB1Q86U70 AC005837.3-201ENST00000612163 286 ntBASIC21.31■■□□□ 1
LDB1Q86U70 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
LDB1Q86U70 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LDB1Q86U70 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.31■■□□□ 1
LDB1Q86U70 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.31■■□□□ 1
LDB1Q86U70 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
LDB1Q86U70 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
LDB1Q86U70 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.3■■□□□ 1
LDB1Q86U70 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LDB1Q86U70 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.3■■□□□ 1
LDB1Q86U70 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.3■■□□□ 1
LDB1Q86U70 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms