Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
Ubp1Q811S7 Gm10033-202ENSMUST00000211874 928 ntBASIC18.58■□□□□ 0.56
Ubp1Q811S7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.58■□□□□ 0.56
Ubp1Q811S7 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.58■□□□□ 0.56
Ubp1Q811S7 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ubp1Q811S7 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.58■□□□□ 0.56
Ubp1Q811S7 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ubp1Q811S7 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.58■□□□□ 0.56
Ubp1Q811S7 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Ubp1Q811S7 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ubp1Q811S7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ubp1Q811S7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ubp1Q811S7 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Ubp1Q811S7 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ubp1Q811S7 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ubp1Q811S7 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ubp1Q811S7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ubp1Q811S7 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ubp1Q811S7 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ubp1Q811S7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ubp1Q811S7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ubp1Q811S7 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ubp1Q811S7 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ubp1Q811S7 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ubp1Q811S7 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ubp1Q811S7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ubp1Q811S7 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ubp1Q811S7 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ubp1Q811S7 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ubp1Q811S7 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.56■□□□□ 0.56
Ubp1Q811S7 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ubp1Q811S7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ubp1Q811S7 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.55■□□□□ 0.56
Ubp1Q811S7 Iqck-206ENSMUST00000208658 2891 ntBASIC18.55■□□□□ 0.56
Ubp1Q811S7 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.55■□□□□ 0.56
Ubp1Q811S7 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ubp1Q811S7 Gm42569-201ENSMUST00000200539 472 ntBASIC18.55■□□□□ 0.56
Ubp1Q811S7 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.55■□□□□ 0.56
Ubp1Q811S7 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ubp1Q811S7 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ubp1Q811S7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ubp1Q811S7 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ubp1Q811S7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ubp1Q811S7 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ubp1Q811S7 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
Ubp1Q811S7 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ubp1Q811S7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ubp1Q811S7 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ubp1Q811S7 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Ubp1Q811S7 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ubp1Q811S7 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ubp1Q811S7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ubp1Q811S7 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ubp1Q811S7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ubp1Q811S7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ubp1Q811S7 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Ubp1Q811S7 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ubp1Q811S7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ubp1Q811S7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.53■□□□□ 0.56
Ubp1Q811S7 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ubp1Q811S7 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ubp1Q811S7 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Ubp1Q811S7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ubp1Q811S7 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ubp1Q811S7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ubp1Q811S7 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ubp1Q811S7 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ubp1Q811S7 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ubp1Q811S7 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ubp1Q811S7 AV356131-201ENSMUST00000206201 750 ntBASIC18.52■□□□□ 0.56
Ubp1Q811S7 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.52■□□□□ 0.56
Ubp1Q811S7 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ubp1Q811S7 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Ubp1Q811S7 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Ubp1Q811S7 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.52■□□□□ 0.56
Ubp1Q811S7 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
Ubp1Q811S7 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ubp1Q811S7 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ubp1Q811S7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ubp1Q811S7 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Ubp1Q811S7 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Ubp1Q811S7 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.51■□□□□ 0.55
Ubp1Q811S7 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Ubp1Q811S7 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ubp1Q811S7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.5■□□□□ 0.55
Ubp1Q811S7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ubp1Q811S7 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Ubp1Q811S7 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ubp1Q811S7 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ubp1Q811S7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ubp1Q811S7 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.5■□□□□ 0.55
Ubp1Q811S7 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ubp1Q811S7 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ubp1Q811S7 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ubp1Q811S7 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Ubp1Q811S7 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
Ubp1Q811S7 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ubp1Q811S7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ubp1Q811S7 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.49■□□□□ 0.55
Ubp1Q811S7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms