Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.21■□□□□ 0.67
NHLRC1Q6VVB1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NHLRC1Q6VVB1 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NHLRC1Q6VVB1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NHLRC1Q6VVB1 AC126544.1-201ENST00000580842 1059 ntBASIC19.21■□□□□ 0.67
NHLRC1Q6VVB1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NHLRC1Q6VVB1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.21■□□□□ 0.67
NHLRC1Q6VVB1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NHLRC1Q6VVB1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NHLRC1Q6VVB1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NHLRC1Q6VVB1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.21■□□□□ 0.67
NHLRC1Q6VVB1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NHLRC1Q6VVB1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NHLRC1Q6VVB1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
NHLRC1Q6VVB1 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NHLRC1Q6VVB1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NHLRC1Q6VVB1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
NHLRC1Q6VVB1 AC091305.1-201ENST00000479476 895 ntBASIC19.2■□□□□ 0.66
NHLRC1Q6VVB1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NHLRC1Q6VVB1 FAM99A-202ENST00000538190 1989 ntBASIC19.2■□□□□ 0.66
NHLRC1Q6VVB1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.2■□□□□ 0.66
NHLRC1Q6VVB1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
NHLRC1Q6VVB1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
NHLRC1Q6VVB1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NHLRC1Q6VVB1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NHLRC1Q6VVB1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.19■□□□□ 0.66
NHLRC1Q6VVB1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NHLRC1Q6VVB1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.19■□□□□ 0.66
NHLRC1Q6VVB1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.19■□□□□ 0.66
NHLRC1Q6VVB1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.19■□□□□ 0.66
NHLRC1Q6VVB1 AC005837.3-201ENST00000612163 286 ntBASIC19.19■□□□□ 0.66
NHLRC1Q6VVB1 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NHLRC1Q6VVB1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NHLRC1Q6VVB1 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
NHLRC1Q6VVB1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NHLRC1Q6VVB1 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NHLRC1Q6VVB1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NHLRC1Q6VVB1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NHLRC1Q6VVB1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
NHLRC1Q6VVB1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NHLRC1Q6VVB1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NHLRC1Q6VVB1 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.18■□□□□ 0.66
NHLRC1Q6VVB1 AC026471.6-201ENST00000622954 1905 ntBASIC19.18■□□□□ 0.66
NHLRC1Q6VVB1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.18■□□□□ 0.66
NHLRC1Q6VVB1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.18■□□□□ 0.66
NHLRC1Q6VVB1 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
NHLRC1Q6VVB1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NHLRC1Q6VVB1 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NHLRC1Q6VVB1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.18■□□□□ 0.66
NHLRC1Q6VVB1 AC010542.4-201ENST00000563151 1910 ntBASIC19.17■□□□□ 0.66
NHLRC1Q6VVB1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NHLRC1Q6VVB1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NHLRC1Q6VVB1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.17■□□□□ 0.66
NHLRC1Q6VVB1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NHLRC1Q6VVB1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NHLRC1Q6VVB1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.17■□□□□ 0.66
NHLRC1Q6VVB1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NHLRC1Q6VVB1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.17■□□□□ 0.66
NHLRC1Q6VVB1 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NHLRC1Q6VVB1 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.17■□□□□ 0.66
NHLRC1Q6VVB1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NHLRC1Q6VVB1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NHLRC1Q6VVB1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NHLRC1Q6VVB1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NHLRC1Q6VVB1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NHLRC1Q6VVB1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NHLRC1Q6VVB1 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
NHLRC1Q6VVB1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NHLRC1Q6VVB1 MIR638-201ENST00000385237 100 ntBASIC19.16■□□□□ 0.66
NHLRC1Q6VVB1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.16■□□□□ 0.66
NHLRC1Q6VVB1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.16■□□□□ 0.66
NHLRC1Q6VVB1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.16■□□□□ 0.66
NHLRC1Q6VVB1 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.16■□□□□ 0.66
NHLRC1Q6VVB1 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.16■□□□□ 0.66
NHLRC1Q6VVB1 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NHLRC1Q6VVB1 TSPY26P-201ENST00000476365 1326 ntBASIC19.16■□□□□ 0.66
NHLRC1Q6VVB1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.16■□□□□ 0.66
NHLRC1Q6VVB1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NHLRC1Q6VVB1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.16■□□□□ 0.66
NHLRC1Q6VVB1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
NHLRC1Q6VVB1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NHLRC1Q6VVB1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NHLRC1Q6VVB1 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NHLRC1Q6VVB1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NHLRC1Q6VVB1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NHLRC1Q6VVB1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NHLRC1Q6VVB1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.15■□□□□ 0.66
NHLRC1Q6VVB1 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.15■□□□□ 0.66
NHLRC1Q6VVB1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
NHLRC1Q6VVB1 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.15■□□□□ 0.66
NHLRC1Q6VVB1 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
NHLRC1Q6VVB1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
NHLRC1Q6VVB1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NHLRC1Q6VVB1 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NHLRC1Q6VVB1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.15■□□□□ 0.66
NHLRC1Q6VVB1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
NHLRC1Q6VVB1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
NHLRC1Q6VVB1 MIR572-201ENST00000384983 95 ntBASIC19.14■□□□□ 0.65
NHLRC1Q6VVB1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NHLRC1Q6VVB1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms