Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Abcf1Q6P542 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC21.08■□□□□ 0.97
Abcf1Q6P542 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Abcf1Q6P542 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Abcf1Q6P542 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Abcf1Q6P542 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Abcf1Q6P542 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Abcf1Q6P542 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Abcf1Q6P542 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.08■□□□□ 0.97
Abcf1Q6P542 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.08■□□□□ 0.97
Abcf1Q6P542 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.08■□□□□ 0.97
Abcf1Q6P542 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Abcf1Q6P542 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Abcf1Q6P542 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Abcf1Q6P542 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC21.08■□□□□ 0.96
Abcf1Q6P542 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Abcf1Q6P542 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC21.07■□□□□ 0.96
Abcf1Q6P542 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.07■□□□□ 0.96
Abcf1Q6P542 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Abcf1Q6P542 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Abcf1Q6P542 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Abcf1Q6P542 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Abcf1Q6P542 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Abcf1Q6P542 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.07■□□□□ 0.96
Abcf1Q6P542 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Abcf1Q6P542 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.07■□□□□ 0.96
Abcf1Q6P542 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Abcf1Q6P542 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Abcf1Q6P542 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Abcf1Q6P542 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Abcf1Q6P542 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Abcf1Q6P542 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Abcf1Q6P542 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC21.06■□□□□ 0.96
Abcf1Q6P542 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Abcf1Q6P542 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Abcf1Q6P542 Serp2-204ENSMUST00000228055 705 ntBASIC21.06■□□□□ 0.96
Abcf1Q6P542 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Abcf1Q6P542 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Abcf1Q6P542 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Abcf1Q6P542 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Abcf1Q6P542 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Abcf1Q6P542 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Abcf1Q6P542 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.06■□□□□ 0.96
Abcf1Q6P542 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Abcf1Q6P542 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Abcf1Q6P542 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Abcf1Q6P542 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Abcf1Q6P542 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Abcf1Q6P542 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Abcf1Q6P542 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Abcf1Q6P542 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Abcf1Q6P542 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.05■□□□□ 0.96
Abcf1Q6P542 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.05■□□□□ 0.96
Abcf1Q6P542 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Abcf1Q6P542 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Abcf1Q6P542 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.05■□□□□ 0.96
Abcf1Q6P542 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.05■□□□□ 0.96
Abcf1Q6P542 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Abcf1Q6P542 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.05■□□□□ 0.96
Abcf1Q6P542 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.05■□□□□ 0.96
Abcf1Q6P542 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Abcf1Q6P542 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Abcf1Q6P542 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.05■□□□□ 0.96
Abcf1Q6P542 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC21.05■□□□□ 0.96
Abcf1Q6P542 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.05■□□□□ 0.96
Abcf1Q6P542 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Abcf1Q6P542 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Abcf1Q6P542 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Abcf1Q6P542 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Abcf1Q6P542 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Abcf1Q6P542 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Abcf1Q6P542 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Abcf1Q6P542 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Abcf1Q6P542 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Abcf1Q6P542 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Abcf1Q6P542 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.04■□□□□ 0.96
Abcf1Q6P542 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Abcf1Q6P542 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC21.03■□□□□ 0.96
Abcf1Q6P542 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Abcf1Q6P542 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Abcf1Q6P542 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Abcf1Q6P542 Spcs1-204ENSMUST00000226782 949 ntBASIC21.03■□□□□ 0.96
Abcf1Q6P542 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC21.03■□□□□ 0.96
Abcf1Q6P542 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Abcf1Q6P542 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.03■□□□□ 0.96
Abcf1Q6P542 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Abcf1Q6P542 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
Abcf1Q6P542 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Abcf1Q6P542 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Abcf1Q6P542 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Abcf1Q6P542 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Abcf1Q6P542 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.02■□□□□ 0.96
Abcf1Q6P542 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Abcf1Q6P542 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
Abcf1Q6P542 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.02■□□□□ 0.96
Abcf1Q6P542 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Abcf1Q6P542 Grk6-206ENSMUST00000224995 2971 ntBASIC21.02■□□□□ 0.96
Abcf1Q6P542 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Abcf1Q6P542 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Abcf1Q6P542 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms