Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH1Q08174 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH1Q08174 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDH1Q08174 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDH1Q08174 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH1Q08174 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH1Q08174 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH1Q08174 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PCDH1Q08174 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH1Q08174 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDH1Q08174 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.65■□□□□ 0.9
PCDH1Q08174 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDH1Q08174 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.65■□□□□ 0.9
PCDH1Q08174 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH1Q08174 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH1Q08174 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.64■□□□□ 0.9
PCDH1Q08174 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDH1Q08174 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.64■□□□□ 0.9
PCDH1Q08174 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDH1Q08174 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
PCDH1Q08174 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH1Q08174 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH1Q08174 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH1Q08174 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH1Q08174 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PCDH1Q08174 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.64■□□□□ 0.89
PCDH1Q08174 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH1Q08174 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
PCDH1Q08174 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH1Q08174 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH1Q08174 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDH1Q08174 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH1Q08174 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH1Q08174 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDH1Q08174 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH1Q08174 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH1Q08174 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDH1Q08174 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDH1Q08174 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PCDH1Q08174 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.63■□□□□ 0.89
PCDH1Q08174 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH1Q08174 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDH1Q08174 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH1Q08174 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PCDH1Q08174 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
PCDH1Q08174 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.63■□□□□ 0.89
PCDH1Q08174 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDH1Q08174 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDH1Q08174 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH1Q08174 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDH1Q08174 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDH1Q08174 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH1Q08174 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH1Q08174 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PCDH1Q08174 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDH1Q08174 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH1Q08174 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH1Q08174 AF213884.3-201ENST00000563833 479 ntBASIC20.62■□□□□ 0.89
PCDH1Q08174 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PCDH1Q08174 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH1Q08174 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDH1Q08174 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PCDH1Q08174 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH1Q08174 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH1Q08174 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH1Q08174 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
PCDH1Q08174 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH1Q08174 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH1Q08174 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDH1Q08174 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH1Q08174 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH1Q08174 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH1Q08174 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH1Q08174 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH1Q08174 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDH1Q08174 MIR572-201ENST00000384983 95 ntBASIC20.61■□□□□ 0.89
PCDH1Q08174 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH1Q08174 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH1Q08174 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH1Q08174 AC104564.3-201ENST00000582367 638 ntBASIC20.61■□□□□ 0.89
PCDH1Q08174 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PCDH1Q08174 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH1Q08174 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH1Q08174 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH1Q08174 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH1Q08174 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDH1Q08174 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH1Q08174 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH1Q08174 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDH1Q08174 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH1Q08174 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH1Q08174 AP006587.3-201ENST00000525742 1516 ntBASIC20.6■□□□□ 0.89
PCDH1Q08174 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.6■□□□□ 0.89
PCDH1Q08174 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.6■□□□□ 0.89
PCDH1Q08174 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH1Q08174 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PCDH1Q08174 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH1Q08174 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PCDH1Q08174 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH1Q08174 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms