Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 HNRNPDL-204ENST00000507721 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.087e-15■■■□□ 18
LSM11P83369 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.591e-7■■■□□ 18
LSM11P83369 CLNS1A-204ENST00000525428 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.711e-10■■■□□ 18
LSM11P83369 BICRAL-203ENST00000614467 6510 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.721e-10■■■□□ 18
LSM11P83369 CLNS1A-206ENST00000526761 415 ntTSL 38.76□□□□□ -1.011e-10■■■□□ 18
LSM11P83369 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -01e-7■■■□□ 18
LSM11P83369 AHSA2-209ENST00000491217 423 ntTSL 39.91□□□□□ -0.822e-10■■■□□ 18
LSM11P83369 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC9.62□□□□□ -0.872e-6■■■□□ 18
LSM11P83369 IRF3-211ENST00000596644 550 ntTSL 213.18□□□□□ -0.33e-6■■■□□ 17.9
LSM11P83369 IRF3-224ENST00000599680 472 ntTSL 312.35□□□□□ -0.433e-6■■■□□ 17.9
LSM11P83369 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.83■□□□□ 0.284e-8■■■□□ 17.9
LSM11P83369 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.274e-8■■■□□ 17.9
LSM11P83369 ZDHHC8-204ENST00000436518 557 ntTSL 414.19□□□□□ -0.142e-6■■■□□ 17.9
LSM11P83369 BCR-204ENST00000427791 771 ntTSL 1 (best)11.38□□□□□ -0.591e-6■■■□□ 17.9
LSM11P83369 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.238e-7■■■□□ 17.9
LSM11P83369 LTBP3-204ENST00000525443 3162 ntTSL 213.72□□□□□ -0.212e-7■■■□□ 17.9
LSM11P83369 MCM7-212ENST00000493352 533 ntTSL 211.7□□□□□ -0.542e-6■■■□□ 17.9
LSM11P83369 MCM7-211ENST00000491245 648 ntTSL 1 (best)7.94□□□□□ -1.142e-6■■■□□ 17.9
LSM11P83369 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.82e-14■■■□□ 17.9
LSM11P83369 ICAM5-203ENST00000586480 2599 ntTSL 1 (best)18.89■□□□□ 0.612e-14■■■□□ 17.9
LSM11P83369 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.43e-9■■■□□ 17.9
LSM11P83369 SRSF2-206ENST00000582449 1518 ntTSL 216.41■□□□□ 0.223e-9■■■□□ 17.9
LSM11P83369 SRSF2-204ENST00000452355 1357 ntTSL 513.83□□□□□ -0.193e-9■■■□□ 17.9
LSM11P83369 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.213e-9■■■□□ 17.9
LSM11P83369 SRSF2-208ENST00000585202 1359 ntTSL 313.73□□□□□ -0.213e-9■■■□□ 17.9
LSM11P83369 SRSF2-209ENST00000586778 1001 ntTSL 213.07□□□□□ -0.323e-9■■■□□ 17.9
LSM11P83369 SEMA4C-203ENST00000449330 839 ntTSL 312.76□□□□□ -0.371e-7■■■□□ 17.9
LSM11P83369 HIST1H2BJ-203ENST00000607124 950 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.912e-22■■■□□ 17.9
LSM11P83369 HIST1H2BJ-202ENST00000606923 408 ntTSL 38.07□□□□□ -1.122e-22■■■□□ 17.9
LSM11P83369 ZFPM2-202ENST00000511341 1582 ntTSL 1 (best)18.39■□□□□ 0.531e-6■■■□□ 17.8
LSM11P83369 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.081e-6■■■□□ 17.8
LSM11P83369 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.29□□□□□ -0.121e-6■■■□□ 17.8
LSM11P83369 ZFPM2-210ENST00000524235 574 ntTSL 412.58□□□□□ -0.41e-6■■■□□ 17.8
LSM11P83369 ZFPM2-205ENST00000520027 594 ntTSL 46.07□□□□□ -1.441e-6■■■□□ 17.8
LSM11P83369 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.53■□□□□ 0.881e-6■■■□□ 17.8
LSM11P83369 CAPN12-202ENST00000593700 1118 ntTSL 1 (best)14.37□□□□□ -0.111e-6■■■□□ 17.8
LSM11P83369 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.64■□□□□ 0.892e-6■■■□□ 17.8
LSM11P83369 LUC7L-207ENST00000426094 2737 ntTSL 1 (best)18.73■□□□□ 0.595e-8■■■□□ 17.8
LSM11P83369 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.06■□□□□ 0.482e-6■■■□□ 17.8
LSM11P83369 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.74■□□□□ 0.275e-8■■■□□ 17.8
LSM11P83369 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.235e-8■■■□□ 17.8
LSM11P83369 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.49■□□□□ 0.235e-8■■■□□ 17.8
LSM11P83369 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.36■□□□□ 0.215e-8■■■□□ 17.8
LSM11P83369 HAGHL-206ENST00000561561 434 ntTSL 215.59■□□□□ 0.092e-6■■■□□ 17.8
LSM11P83369 LUC7L-209ENST00000429378 721 ntTSL 315.4■□□□□ 0.065e-8■■■□□ 17.8
LSM11P83369 LUC7L-213ENST00000464711 2134 ntTSL 214.45□□□□□ -0.12e-8■■■□□ 17.8
LSM11P83369 HAGHL-218ENST00000569385 440 ntTSL 213.91□□□□□ -0.182e-6■■■□□ 17.8
LSM11P83369 LUC7L-217ENST00000490762 2643 ntTSL 1 (best)13.02□□□□□ -0.325e-8■■■□□ 17.8
LSM11P83369 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.26■■□□□ 1.631e-6■■■□□ 17.8
LSM11P83369 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.83■■□□□ 1.571e-6■■■□□ 17.8
LSM11P83369 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.622e-8■■■□□ 17.8
LSM11P83369 AGAP3-209ENST00000469901 582 ntTSL 317.2■□□□□ 0.341e-6■■■□□ 17.8
LSM11P83369 AGAP3-226ENST00000622464 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.422e-8■■■□□ 17.8
LSM11P83369 TANGO2-221ENST00000476940 414 ntTSL 511.64□□□□□ -0.559e-7■■■□□ 17.8
LSM11P83369 COL16A1-215ENST00000488897 2423 ntTSL 1 (best)17■□□□□ 0.311e-6■■■□□ 17.8
LSM11P83369 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.131e-6■■■□□ 17.8
LSM11P83369 COL16A1-214ENST00000488128 2854 ntTSL 513.56□□□□□ -0.241e-6■■■□□ 17.8
LSM11P83369 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.26■□□□□ 0.833e-7■■■□□ 17.8
LSM11P83369 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.683e-7■■■□□ 17.8
LSM11P83369 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.88■□□□□ 0.293e-7■■■□□ 17.8
LSM11P83369 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.36■□□□□ 0.213e-7■■■□□ 17.8
LSM11P83369 FOSL1-205ENST00000534222 584 ntTSL 311.67□□□□□ -0.543e-7■■■□□ 17.8
LSM11P83369 ARHGAP4-217ENST00000466928 840 ntTSL 216.26■□□□□ 0.193e-6■■■□□ 17.8
LSM11P83369 L1CAM-212ENST00000464967 593 ntTSL 211.51□□□□□ -0.573e-6■■■□□ 17.8
LSM11P83369 HGD-201ENST00000283871 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.092e-9■■■□□ 17.8
LSM11P83369 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.213e-6■■■□□ 17.7
LSM11P83369 UQCRC1-203ENST00000415995 1387 ntTSL 514.51□□□□□ -0.093e-6■■■□□ 17.7
LSM11P83369 KIAA0895L-204ENST00000562514 512 ntTSL 513.27□□□□□ -0.294e-8■■■□□ 17.7
LSM11P83369 UQCRC1-209ENST00000480561 1014 ntTSL 212.59□□□□□ -0.393e-6■■■□□ 17.7
LSM11P83369 ZNF266-206ENST00000592292 3100 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.535e-6■■■□□ 17.7
LSM11P83369 UQCRC1-207ENST00000471189 955 ntTSL 311.48□□□□□ -0.573e-6■■■□□ 17.7
LSM11P83369 ZNF266-202ENST00000588221 3503 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.745e-6■■■□□ 17.7
LSM11P83369 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.575e-6■■■□□ 17.7
LSM11P83369 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.785e-6■■■□□ 17.7
LSM11P83369 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.855e-6■■■□□ 17.7
LSM11P83369 OAZ1-204ENST00000588673 780 ntTSL 317.99■□□□□ 0.473e-8■■■□□ 17.7
LSM11P83369 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.581e-6■■■□□ 17.7
LSM11P83369 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.351e-6■■■□□ 17.7
LSM11P83369 RHEB-205ENST00000478470 1153 ntTSL 521.62■■□□□ 1.051e-6■■■□□ 17.7
LSM11P83369 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.64■□□□□ 0.411e-6■■■□□ 17.7
LSM11P83369 RHEB-207ENST00000496004 744 ntTSL 2 BASIC12.68□□□□□ -0.381e-6■■■□□ 17.7
LSM11P83369 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.59□□□□□ -0.078e-8■■■□□ 17.7
LSM11P83369 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC27.65■■■□□ 2.027e-9■■■□□ 17.7
LSM11P83369 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.187e-9■■■□□ 17.7
LSM11P83369 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.296e-8■■■□□ 17.7
LSM11P83369 OAZ1-210ENST00000593012 1357 ntTSL 216.86■□□□□ 0.296e-8■■■□□ 17.7
LSM11P83369 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.116e-8■■■□□ 17.7
LSM11P83369 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.016e-8■■■□□ 17.7
LSM11P83369 OAZ1-201ENST00000581150 1131 ntTSL 514.98□□□□□ -0.016e-8■■■□□ 17.7
LSM11P83369 OAZ1-207ENST00000590943 1012 ntTSL 214.28□□□□□ -0.126e-8■■■□□ 17.7
LSM11P83369 ACAP3-204ENST00000379037 492 ntTSL 314.73□□□□□ -0.059e-7■■■□□ 17.7
LSM11P83369 AHSA2-211ENST00000493628 633 ntTSL 310.54□□□□□ -0.722e-10■■■□□ 17.7
LSM11P83369 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC9.77□□□□□ -0.852e-10■■■□□ 17.7
LSM11P83369 AHSA2-206ENST00000484217 1741 ntTSL 58.42□□□□□ -1.062e-10■■■□□ 17.7
LSM11P83369 PHKA2-207ENST00000481718 3115 ntTSL 29.37□□□□□ -0.914e-8■■■□□ 17.7
LSM11P83369 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.799e-7■■■□□ 17.7
LSM11P83369 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.91■□□□□ 0.789e-7■■■□□ 17.7
LSM11P83369 KIF12-206ENST00000639832 2564 ntTSL 218.37■□□□□ 0.539e-7■■■□□ 17.7
LSM11P83369 KIF12-208ENST00000640553 2003 ntTSL 1 (best)13.48□□□□□ -0.259e-7■■■□□ 17.7
LSM11P83369 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.02□□□□□ -0.339e-7■■■□□ 17.7
Retrieved 100 of 11,495 protein–RNA pairs in 67.9 ms