Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ldb1P70662 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ldb1P70662 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ldb1P70662 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ldb1P70662 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ldb1P70662 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ldb1P70662 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ldb1P70662 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ldb1P70662 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ldb1P70662 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ldb1P70662 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ldb1P70662 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.81■□□□□ 0.6
Ldb1P70662 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ldb1P70662 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.81■□□□□ 0.6
Ldb1P70662 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.81■□□□□ 0.6
Ldb1P70662 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ldb1P70662 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Ldb1P70662 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.81■□□□□ 0.6
Ldb1P70662 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ldb1P70662 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ldb1P70662 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.8■□□□□ 0.6
Ldb1P70662 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ldb1P70662 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ldb1P70662 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ldb1P70662 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ldb1P70662 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ldb1P70662 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ldb1P70662 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.8■□□□□ 0.6
Ldb1P70662 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ldb1P70662 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Ldb1P70662 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ldb1P70662 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.8■□□□□ 0.6
Ldb1P70662 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ldb1P70662 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ldb1P70662 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ldb1P70662 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Ldb1P70662 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ldb1P70662 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ldb1P70662 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ldb1P70662 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ldb1P70662 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ldb1P70662 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ldb1P70662 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ldb1P70662 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ldb1P70662 Gm38205-201ENSMUST00000192243 258 ntBASIC18.79■□□□□ 0.6
Ldb1P70662 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.79■□□□□ 0.6
Ldb1P70662 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ldb1P70662 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ldb1P70662 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Ldb1P70662 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ldb1P70662 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ldb1P70662 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ldb1P70662 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.78■□□□□ 0.6
Ldb1P70662 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ldb1P70662 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ldb1P70662 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.78■□□□□ 0.6
Ldb1P70662 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ldb1P70662 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ldb1P70662 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ldb1P70662 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ldb1P70662 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ldb1P70662 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Ldb1P70662 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ldb1P70662 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ldb1P70662 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Ldb1P70662 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ldb1P70662 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ldb1P70662 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ldb1P70662 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.77■□□□□ 0.6
Ldb1P70662 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
Ldb1P70662 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Ldb1P70662 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ldb1P70662 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.77■□□□□ 0.6
Ldb1P70662 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ldb1P70662 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Ldb1P70662 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ldb1P70662 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ldb1P70662 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ldb1P70662 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ldb1P70662 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ldb1P70662 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ldb1P70662 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ldb1P70662 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ldb1P70662 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ldb1P70662 BC021767-201ENSMUST00000126387 1716 ntBASIC18.76■□□□□ 0.59
Ldb1P70662 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ldb1P70662 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ldb1P70662 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ldb1P70662 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ldb1P70662 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ldb1P70662 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ldb1P70662 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ldb1P70662 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ldb1P70662 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.75■□□□□ 0.59
Ldb1P70662 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ldb1P70662 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ldb1P70662 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Ldb1P70662 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ldb1P70662 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ldb1P70662 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms