Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Gm20100-201ENSMUST00000209418 2272 ntBASIC13.44□□□□□ -0.26
Cks1bP61025 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC13.44□□□□□ -0.26
Cks1bP61025 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cks1bP61025 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cks1bP61025 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cks1bP61025 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cks1bP61025 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cks1bP61025 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cks1bP61025 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cks1bP61025 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC13.44□□□□□ -0.26
Cks1bP61025 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cks1bP61025 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cks1bP61025 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cks1bP61025 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cks1bP61025 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cks1bP61025 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cks1bP61025 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC13.44□□□□□ -0.26
Cks1bP61025 Gm45141-201ENSMUST00000206502 1888 ntBASIC13.44□□□□□ -0.26
Cks1bP61025 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cks1bP61025 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cks1bP61025 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC13.43□□□□□ -0.26
Cks1bP61025 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cks1bP61025 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cks1bP61025 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cks1bP61025 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cks1bP61025 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC13.43□□□□□ -0.26
Cks1bP61025 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cks1bP61025 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cks1bP61025 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cks1bP61025 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cks1bP61025 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cks1bP61025 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cks1bP61025 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Cks1bP61025 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cks1bP61025 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cks1bP61025 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cks1bP61025 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cks1bP61025 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Cks1bP61025 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cks1bP61025 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cks1bP61025 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cks1bP61025 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cks1bP61025 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cks1bP61025 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cks1bP61025 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.42□□□□□ -0.26
Cks1bP61025 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Cks1bP61025 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC13.42□□□□□ -0.26
Cks1bP61025 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC13.42□□□□□ -0.26
Cks1bP61025 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Cks1bP61025 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cks1bP61025 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cks1bP61025 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC13.42□□□□□ -0.26
Cks1bP61025 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cks1bP61025 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cks1bP61025 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cks1bP61025 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cks1bP61025 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cks1bP61025 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cks1bP61025 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cks1bP61025 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Cks1bP61025 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cks1bP61025 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cks1bP61025 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cks1bP61025 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cks1bP61025 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cks1bP61025 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Cks1bP61025 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cks1bP61025 Nsd1-203ENSMUST00000224156 1149 ntBASIC13.41□□□□□ -0.26
Cks1bP61025 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cks1bP61025 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cks1bP61025 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cks1bP61025 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cks1bP61025 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cks1bP61025 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cks1bP61025 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cks1bP61025 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cks1bP61025 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cks1bP61025 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cks1bP61025 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cks1bP61025 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cks1bP61025 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cks1bP61025 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cks1bP61025 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.4□□□□□ -0.26
Cks1bP61025 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cks1bP61025 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Cks1bP61025 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cks1bP61025 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cks1bP61025 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cks1bP61025 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.4□□□□□ -0.26
Cks1bP61025 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cks1bP61025 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Cks1bP61025 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cks1bP61025 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC13.4□□□□□ -0.26
Cks1bP61025 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Cks1bP61025 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cks1bP61025 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC13.4□□□□□ -0.26
Cks1bP61025 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cks1bP61025 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cks1bP61025 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cks1bP61025 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms