Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lim2P56563 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Lim2P56563 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.92■□□□□ 0.62
Lim2P56563 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Lim2P56563 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Lim2P56563 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.91■□□□□ 0.62
Lim2P56563 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.91■□□□□ 0.62
Lim2P56563 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.91■□□□□ 0.62
Lim2P56563 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lim2P56563 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lim2P56563 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Lim2P56563 Gm7860-201ENSMUST00000121190 879 ntBASIC18.91■□□□□ 0.62
Lim2P56563 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Lim2P56563 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.91■□□□□ 0.62
Lim2P56563 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.91■□□□□ 0.62
Lim2P56563 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Lim2P56563 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.91■□□□□ 0.62
Lim2P56563 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lim2P56563 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lim2P56563 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.91■□□□□ 0.62
Lim2P56563 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.91■□□□□ 0.62
Lim2P56563 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lim2P56563 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lim2P56563 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lim2P56563 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lim2P56563 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lim2P56563 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lim2P56563 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.9■□□□□ 0.62
Lim2P56563 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.9■□□□□ 0.62
Lim2P56563 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lim2P56563 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lim2P56563 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lim2P56563 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lim2P56563 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Lim2P56563 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.9■□□□□ 0.62
Lim2P56563 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lim2P56563 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lim2P56563 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Lim2P56563 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Lim2P56563 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Lim2P56563 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lim2P56563 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Lim2P56563 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lim2P56563 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lim2P56563 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.89■□□□□ 0.61
Lim2P56563 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lim2P56563 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Lim2P56563 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lim2P56563 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Lim2P56563 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Lim2P56563 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Lim2P56563 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.88■□□□□ 0.61
Lim2P56563 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lim2P56563 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lim2P56563 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lim2P56563 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lim2P56563 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.88■□□□□ 0.61
Lim2P56563 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Lim2P56563 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Lim2P56563 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Lim2P56563 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.87■□□□□ 0.61
Lim2P56563 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Lim2P56563 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lim2P56563 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lim2P56563 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Lim2P56563 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lim2P56563 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lim2P56563 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lim2P56563 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Lim2P56563 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lim2P56563 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lim2P56563 Gm13146-201ENSMUST00000118508 780 ntBASIC18.86■□□□□ 0.61
Lim2P56563 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lim2P56563 Gm27405-201ENSMUST00000184201 112 ntBASIC18.86■□□□□ 0.61
Lim2P56563 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.86■□□□□ 0.61
Lim2P56563 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lim2P56563 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lim2P56563 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lim2P56563 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lim2P56563 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lim2P56563 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lim2P56563 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lim2P56563 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lim2P56563 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lim2P56563 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lim2P56563 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lim2P56563 BC021767-201ENSMUST00000126387 1716 ntBASIC18.86■□□□□ 0.61
Lim2P56563 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lim2P56563 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lim2P56563 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lim2P56563 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.85■□□□□ 0.61
Lim2P56563 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Lim2P56563 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Lim2P56563 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
Lim2P56563 Gm7291-201ENSMUST00000199147 382 ntBASIC18.85■□□□□ 0.61
Lim2P56563 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.85■□□□□ 0.61
Lim2P56563 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lim2P56563 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lim2P56563 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lim2P56563 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms