Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.28■□□□□ 0.84
Nub1P54729 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Nub1P54729 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.28■□□□□ 0.84
Nub1P54729 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nub1P54729 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nub1P54729 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nub1P54729 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nub1P54729 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nub1P54729 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nub1P54729 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.27■□□□□ 0.84
Nub1P54729 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.27■□□□□ 0.84
Nub1P54729 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nub1P54729 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.27■□□□□ 0.84
Nub1P54729 Gm8495-201ENSMUST00000188740 694 ntBASIC20.27■□□□□ 0.84
Nub1P54729 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nub1P54729 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nub1P54729 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nub1P54729 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.27■□□□□ 0.83
Nub1P54729 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nub1P54729 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Nub1P54729 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Nub1P54729 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Nub1P54729 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.26■□□□□ 0.83
Nub1P54729 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Nub1P54729 Gm42778-201ENSMUST00000199644 553 ntBASIC20.26■□□□□ 0.83
Nub1P54729 Gm42642-201ENSMUST00000200683 355 ntBASIC20.26■□□□□ 0.83
Nub1P54729 Gm10033-202ENSMUST00000211874 928 ntBASIC20.26■□□□□ 0.83
Nub1P54729 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.26■□□□□ 0.83
Nub1P54729 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nub1P54729 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nub1P54729 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nub1P54729 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nub1P54729 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nub1P54729 Gm13146-201ENSMUST00000118508 780 ntBASIC20.25■□□□□ 0.83
Nub1P54729 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nub1P54729 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nub1P54729 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.25■□□□□ 0.83
Nub1P54729 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nub1P54729 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nub1P54729 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.25■□□□□ 0.83
Nub1P54729 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Nub1P54729 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nub1P54729 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nub1P54729 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nub1P54729 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.24■□□□□ 0.83
Nub1P54729 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.24■□□□□ 0.83
Nub1P54729 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.24■□□□□ 0.83
Nub1P54729 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nub1P54729 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Nub1P54729 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nub1P54729 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nub1P54729 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.24■□□□□ 0.83
Nub1P54729 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nub1P54729 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.23■□□□□ 0.83
Nub1P54729 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nub1P54729 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.23■□□□□ 0.83
Nub1P54729 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nub1P54729 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nub1P54729 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nub1P54729 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nub1P54729 Gm26571-201ENSMUST00000181399 666 ntBASIC20.23■□□□□ 0.83
Nub1P54729 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nub1P54729 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nub1P54729 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Nub1P54729 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Nub1P54729 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nub1P54729 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nub1P54729 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nub1P54729 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nub1P54729 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nub1P54729 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nub1P54729 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nub1P54729 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.22■□□□□ 0.83
Nub1P54729 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Nub1P54729 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nub1P54729 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nub1P54729 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Nub1P54729 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nub1P54729 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
Nub1P54729 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nub1P54729 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nub1P54729 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nub1P54729 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nub1P54729 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nub1P54729 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nub1P54729 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nub1P54729 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nub1P54729 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nub1P54729 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.2■□□□□ 0.82
Nub1P54729 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.2■□□□□ 0.82
Nub1P54729 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.2■□□□□ 0.82
Nub1P54729 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nub1P54729 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nub1P54729 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nub1P54729 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nub1P54729 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.2■□□□□ 0.82
Nub1P54729 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nub1P54729 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nub1P54729 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nub1P54729 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms